RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OATP04181 439 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 MAPTP10636 758 aaKnown RBP10.14□□□□□ -0.79
CUX1-206ENST00000437600 NR1D1P20393 614 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 RRM1P23921 792 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 LIG4P49917 911 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 STAT5BP51692 787 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 IGBP1P78318 339 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 POU5F1Q01860 360 aaKnown RBP10.14□□□□□ -0.79
CUX1-206ENST00000437600 ZNF844Q08AG5 666 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 NFIL3Q16649 462 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 TTC31Q49AM3 519 aaPredicted RBP10.14□□□□□ -0.79
CUX1-206ENST00000437600 ATP13A4Q4VNC1 1196 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 XKR3Q5GH77 459 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 MAP4K3Q8IVH8 894 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 CCDC105Q8IYK2 499 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 HERPUD2Q9BSE4 406 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 SEMA4AQ9H3S1 761 aa10.14□□□□□ -0.79
CUX1-206ENST00000437600 CNOT8Q9UFF9 292 aaKnown RBP10.14□□□□□ -0.79
CUX1-206ENST00000437600 A0A0A6YYK5 440 aaPredicted RBP10.13□□□□□ -0.79
CUX1-206ENST00000437600 RTN2O75298 545 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 MFAP3P55082 362 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 OR5B17Q8NGF7 314 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 SLC7A3Q8WY07 619 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 NT5C1BQ96P26 610 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 PLXNB2O15031 1838 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 PLXNA1Q9UIW2 1896 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 H0YGN5 161 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 NDUFAB1O14561 156 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 CST3P01034 146 aaPredicted RBP10.13□□□□□ -0.79
CUX1-206ENST00000437600 RARAP10276 462 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 CD58P19256 250 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 SCP2P22307 547 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 FGFR4P22455 802 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 GLRA2P23416 452 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 TNFSF9P41273 254 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 PSMC4P43686 418 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 MAGOHP61326 146 aaKnown RBP10.13□□□□□ -0.79
CUX1-206ENST00000437600 CYP24A1Q07973 514 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 ADCY1Q08828 1119 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 IFFO1Q0D2I5 559 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 KRT71Q3SY84 523 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 CCDC137Q6PK04 289 aaKnown RBP10.13□□□□□ -0.79
CUX1-206ENST00000437600 TMEM270Q6UE05 265 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 JAMLQ86YT9 394 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 GPRC5AQ8NFJ5 357 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 ACSF2Q96CM8 615 aaPredicted RBP10.13□□□□□ -0.79
CUX1-206ENST00000437600 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 FNBP1Q96RU3 617 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 SENP7Q9BQF6 1050 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 ANAPC7Q9UJX3 599 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 NFS1Q9Y697 457 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 NFASCO94856 1347 aa10.13□□□□□ -0.79
CUX1-206ENST00000437600 K7ERI5 159 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 PPFIA4O75335 1185 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 MYZAPP0CAP1 466 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 TXNP10599 105 aaKnown RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 PEX5P50542 639 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 PDE6CP51160 858 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 CCDC38Q502W7 563 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ZFYVE27Q5T4F4 411 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 PACS2Q86VP3 889 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 GPD1LQ8N335 351 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ATP8B4Q8TF62 1192 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 SHC3Q92529 594 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 KIFAP3Q92845 792 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ATP6V1G3Q96LB4 118 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 SPATA33Q96N06 139 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ERP44Q9BS26 406 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ADAM33Q9BZ11 813 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 PNMA3Q9UL41 463 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 INTUQ9ULD6 942 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 MAFBQ9Y5Q3 323 aaPredicted RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 E7EVH7 732 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 EIF3HO15372 352 aaKnown RBP eCLIP10.12□□□□□ -0.791e-7■■■□□ 16.5
CUX1-206ENST00000437600 SLC10A3P09131 477 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 HSPA9P38646 679 aaKnown RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 RPL21P46778 160 aaKnown RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 CRHR2Q13324 411 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ORC1Q13415 861 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 MTM1Q13496 603 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 SLC29A2Q14542 456 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 HP1BP3Q5SSJ5 553 aaPredicted RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 TMC3Q7Z5M5 1100 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 GPATCH11Q8N954 259 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 MCPH1Q8NEM0 835 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 RDM1Q8NG50 284 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 DDX1Q92499 740 aaKnown RBP10.12□□□□□ -0.79
CUX1-206ENST00000437600 FMO2Q99518 471 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 PDLIM7Q9NR12 457 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 UBE4BO95155 1302 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 GOLGA6L10A6NI86 522 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 CCDC188H7C350 402 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 CAND2O75155 1236 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 TCF4P15884 667 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 EDNRBP24530 442 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 ADORA2AP29274 412 aa10.12□□□□□ -0.79
CUX1-206ENST00000437600 LSP1P33241 339 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms