RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CYBAP13498 195 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 MCM3P25205 808 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 HOXD10P28358 340 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 HOXC8P31273 242 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 GRM5P41594 1212 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 TFAMQ00059 246 aaKnown RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 FMO1Q01740 532 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 RPS6KA1Q15418 735 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 CFAP221Q4G0U5 840 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 COL13A1Q5TAT6 717 aaPredicted RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 CCDC181Q5TID7 509 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 NOTUMQ6P988 496 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 C7orf31Q8N865 590 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 LRRC57Q8N9N7 239 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 SLC20A1Q8WUM9 679 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 ZBTB10Q96DT7 871 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 PBKQ96KB5 322 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 CCDC94Q9BW85 323 aaPredicted RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 TLR10Q9BXR5 811 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 MTMR12Q9C0I1 747 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 PUF60Q9UHX1 559 aaKnown RBP16.48■□□□□ 0.23
SGCE-205ENST00000437425 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 PCNTO95613 3336 aa16.48■□□□□ 0.23
SGCE-205ENST00000437425 SEPT4O43236 478 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 GPR32O75388 356 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 MTA2O94776 668 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 P4HA1P13674 534 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 DARSP14868 501 aaKnown RBP16.47■□□□□ 0.23
SGCE-205ENST00000437425 CHRNB2P17787 502 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 ACO1P21399 889 aaKnown RBP16.47■□□□□ 0.23
SGCE-205ENST00000437425 CLUL1Q15846 466 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 TEX35Q5T0J7 233 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 SLC35G2Q8TBE7 412 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 DDX1Q92499 740 aaKnown RBP16.47■□□□□ 0.23
SGCE-205ENST00000437425 TSC1Q92574 1164 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 SELENOOQ9BVL4 669 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 VRTNQ9H8Y1 702 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 UVRAGQ9P2Y5 699 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 PCDHB4Q9Y5E5 795 aa16.47■□□□□ 0.23
SGCE-205ENST00000437425 CXCL8P10145 99 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 RARBP10826 455 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 EIF4BP23588 611 aaKnown RBP16.46■□□□□ 0.23
SGCE-205ENST00000437425 FLT3LGP49771 235 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 DEFB115Q30KQ5 88 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 ZNF699Q32M78 642 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 CYP4F22Q6NT55 531 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 CATSPER4Q7RTX7 472 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 PEX26Q7Z412 305 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 CREG2Q8IUH2 290 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 RUBCNQ92622 972 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 ZNF668Q96K58 619 aaPredicted RBP16.46■□□□□ 0.23
SGCE-205ENST00000437425 APOBEC3GQ9HC16 384 aaKnown RBP16.46■□□□□ 0.23
SGCE-205ENST00000437425 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
SGCE-205ENST00000437425 GTF3C4Q9UKN8 822 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 AMFRQ9UKV5 643 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
SGCE-205ENST00000437425 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
SGCE-205ENST00000437425 CASP8AP2Q9UKL3 1982 aa16.46■□□□□ 0.22
SGCE-205ENST00000437425 TMCO5BA8MYB1 307 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CLSTN1O94985 981 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 STAU1O95793 577 aaKnown RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 GNRH1P01148 92 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 MMEP08473 750 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 ABCB4P21439 1286 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CTGFP29279 349 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 SP3Q02447 781 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CLEC16AQ2KHT3 1053 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 DAAM2Q86T65 1068 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 RSPH3Q86UC2 560 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 EFCAB13Q8IY85 973 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 LRRN4CLQ8ND94 238 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 FAM49AQ9H0Q0 323 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 THAP2Q9H0W7 228 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 ITGA11Q9UKX5 1188 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 LACTBL1A8MY62 500 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 KIF4AO95239 1232 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 CST3P01034 146 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 CYP1A2P05177 515 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 C6orf222P0C671 652 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 H2AFXP16104 143 aaPredicted RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 GNA15P30679 374 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 ZNF132P52740 706 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 YARSP54577 528 aaKnown RBP16.45■□□□□ 0.22
SGCE-205ENST00000437425 MYL6P60660 151 aa16.45■□□□□ 0.22
SGCE-205ENST00000437425 OSTNP61366 133 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms