RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 EYSQ5T1H1 3165 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 PDCD11Q14690 1871 aaKnown RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 PRUNE2Q8WUY3 3088 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 TULP1O00294 542 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 KLRC4O43908 158 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 TBX10O75333 385 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 IL18RAPO95256 599 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 GLP2RO95838 553 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 RPN1P04843 607 aaKnown RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 ADH1AP07327 375 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 CYP3A5P20815 502 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 KLRC2P26717 231 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 LTBRP36941 435 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 KCNQ1P51787 676 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 DSG1Q02413 1049 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 SPAG1Q07617 926 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 FAM171A1Q5VUB5 890 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 PDXDC1Q6P996 788 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 NELFCDQ8IXH7 590 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 BEST2Q8NFU1 509 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 NOC3LQ8WTT2 800 aaKnown RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 SCFD1Q8WVM8 642 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 RIN2Q8WYP3 895 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 C18orf25Q96B23 403 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 SAAL1Q96ER3 474 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 KLHL5Q96PQ7 755 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 FAM213AQ9BRX8 229 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 TTPALQ9BTX7 342 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 CHST7Q9NS84 486 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 TUBGCP4Q9UGJ1 667 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 CD207Q9UJ71 328 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 BARX2Q9UMQ3 279 aaPredicted RBP12.44□□□□□ -0.42
COL28A1-203ENST00000435823 DERAQ9Y315 318 aa12.44□□□□□ -0.42
COL28A1-203ENST00000435823 BRWD1Q9NSI6 2320 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 EXTL3O43909 919 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 LILRB3O75022 631 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 ADRB2P07550 413 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 CNPP09543 421 aaKnown RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 SNRPFP62306 86 aaKnown RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 DLX2Q07687 328 aaPredicted RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 CLUL1Q15846 466 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 BMT2Q1RMZ1 405 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 JADE1Q6IE81 842 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 ELMSAN1Q6PJG2 1045 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 TMEM184AQ6ZMB5 413 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 HS2ST1Q7LGA3 356 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 BRSK2Q8IWQ3 736 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 CBWD1Q9BRT8 395 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 PCIF1Q9H4Z3 704 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 RXFP1Q9HBX9 757 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 RBAKQ9NYW8 714 aaPredicted RBP12.43□□□□□ -0.42
COL28A1-203ENST00000435823 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 C2CD2Q9Y426 696 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 HCFC2Q9Y5Z7 792 aa12.43□□□□□ -0.42
COL28A1-203ENST00000435823 GOLGA8IPA6NC78 632 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 GOLGA8JA6NMD2 632 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 TEX28O15482 410 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 KIF20AO95235 890 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 NFICP08651 508 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 BMP1P13497 986 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 HOXB8P17481 243 aaPredicted RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 LRPAP1P30533 357 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 MCM4P33991 863 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 DPYDQ12882 1025 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 KCNC3Q14003 757 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 PSMD5Q16401 504 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 KNOP1Q1ED39 458 aaKnown RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 SPATA1Q5VX52 437 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 ANKRD54Q6NXT1 300 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 C3orf58Q8NDZ4 430 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 VN1R2Q8NFZ6 395 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 GOLGA5Q8TBA6 731 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 ADAMTS19Q8TE59 1207 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 PIK3R5Q8WYR1 880 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 MSLNLQ96KJ4 702 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 KIAA1586Q9HCI6 787 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 AGPAT3Q9NRZ7 376 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 DZANK1Q9NVP4 752 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 FNIP2Q9P278 1114 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 CGNQ9P2M7 1197 aaKnown RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 DPP7Q9UHL4 492 aa12.42□□□□□ -0.42
COL28A1-203ENST00000435823 HOOK1Q9UJC3 728 aaKnown RBP12.42□□□□□ -0.42
COL28A1-203ENST00000435823 GRXCR2A6NFK2 248 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms