RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 NUB1Q9Y5A7 615 aa17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 MKI67P46013 3256 aaKnown RBP17.87■□□□□ 0.45
CTDSPL-204ENST00000435525 LINC01553A4QN01 128 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 CASTOR2A6NHX0 329 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 KCNJ18B7U540 433 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 TADA2AO75478 443 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 KRT19P08727 400 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 LRPAP1P30533 357 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 CTNNB1P35222 781 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 BMPR1AP36894 532 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 AFF1P51825 1210 aaKnown RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 ELAVL2Q12926 359 aaKnown RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 MYO1EQ12965 1108 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 KCNJ12Q14500 433 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 ZBTB6Q15916 424 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 ZNF280BQ86YH2 543 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 COLGALT1Q8NBJ5 622 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 C18orf25Q96B23 403 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 TMEM169Q96HH4 297 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 C11orf84Q9BUA3 381 aaPredicted RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 IMPG2Q9BZV3 1241 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 MTMR12Q9C0I1 747 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 CWH43Q9H720 699 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 PUF60Q9UHX1 559 aaKnown RBP17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 PLAGL2Q9UPG8 496 aa17.86■□□□□ 0.45
CTDSPL-204ENST00000435525 TMEM265A0A087WTH1 108 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 PODXLO00592 558 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 DDHD2O94830 711 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 GALTP07902 379 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 MYOGP15173 224 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 CLDN10P78369 228 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 KRT39Q6A163 491 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 EFCAB13Q8IY85 973 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 BORCS6Q96GS4 357 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 MED15Q96RN5 788 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 CBX8Q9HC52 389 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 TMEM8AQ9HCN3 771 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 FANCLQ9NW38 375 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 TUBGCP4Q9UGJ1 667 aa17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 YBX2Q9Y2T7 364 aaKnown RBP17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 PRG3Q9Y2Y8 225 aaPredicted RBP17.85■□□□□ 0.45
CTDSPL-204ENST00000435525 COL4A6Q14031 1691 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 LCHNA4D1U4 455 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 PES1O00541 588 aaKnown RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 NRP1O14786 923 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 MEFVO15553 781 aaPredicted RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 B3GAT3O94766 335 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 TRIM49P0CI25 452 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 TRIM49CP0CI26 452 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 PBX2P40425 430 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 SLC11A1P49279 550 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 MXI1P50539 228 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 ERVK-21P61565 698 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 MAN2A1Q16706 1144 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 SV2CQ496J9 727 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 TCP11X2Q5H9J9 407 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 LMBRD2Q68DH5 695 aaPredicted RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 TRAPPC11Q7Z392 1133 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 TRIM59Q8IWR1 403 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 LRRC52Q8N7C0 313 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 FBXO22Q8NEZ5 403 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 POP1Q99575 1024 aaKnown RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 MMRN2Q9H8L6 949 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 SAMSN1Q9NSI8 373 aaKnown RBP17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 DNAJB4Q9UDY4 337 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 AGAP1Q9UPQ3 857 aa17.84■□□□□ 0.45
CTDSPL-204ENST00000435525 SF3B1O75533 1304 aaKnown RBP eCLIP17.83■□□□□ 0.443e-9■■■■■ 206.8
CTDSPL-204ENST00000435525 TMEM189-UBE2V1I3L0A0 370 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 P4HA2O15460 535 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 ITGB3P05106 788 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 ATICP31939 592 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 PIK3CAP42336 1068 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 GCLMP48507 274 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 TAF6P49848 677 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 CLCNKBP51801 687 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 TAP1Q03518 808 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 NAB2Q15742 525 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 UPP1Q16831 310 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 C9orf57Q5W0N0 161 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 C1orf127Q8N9H9 656 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 OR5B17Q8NGF7 314 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 SLC35C1Q96A29 364 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 TUBGCP2Q9BSJ2 902 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 CXCL16Q9H2A7 254 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 GOLGA2P5Q9HBQ8 144 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 ADAM28Q9UKQ2 775 aa17.83■□□□□ 0.44
CTDSPL-204ENST00000435525 P4HA1P13674 534 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 POLR2BP30876 1174 aaKnown RBP17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 WNT7BP56706 349 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 MCCD1P59942 119 aaPredicted RBP17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 DLG4P78352 724 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 MYL7Q01449 175 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 UBE3AQ05086 875 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 SOX4Q06945 474 aaPredicted RBP17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 NCOA4Q13772 614 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 IQCB1Q15051 598 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 ZACNQ401N2 412 aa17.82■□□□□ 0.44
CTDSPL-204ENST00000435525 FILIP1LQ4L180 1135 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms