RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 PPP1R2P41236 205 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 VBP1P61758 197 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 RPP38P78345 283 aaKnown RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF33BQ06732 778 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 CDC20Q12834 499 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 STK4Q13043 487 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 GIT2Q14161 759 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 PPP1R2P3Q6NXS1 205 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 USP50Q70EL3 339 aaPredicted RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 NRG4Q8WWG1 115 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 FATE1Q969F0 183 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 NUDT16Q96DE0 195 aaKnown RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 OPALINQ96PE5 141 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 CDRT15Q96T59 188 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 OSBPL6Q9BZF3 934 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 LIN7BQ9HAP6 207 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 SH3GLB2Q9NR46 395 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 STMN3Q9NZ72 180 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.56
CCDC171-202ENST00000432954 WDR19Q8NEZ3 1342 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.56
CCDC171-202ENST00000432954 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 OR6B1O95007 311 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ESRRBO95718 433 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 AFPP02771 609 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ICAM2P13598 275 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ATP1A3P13637 1013 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 MUTP22033 750 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 HADHAP40939 763 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 RPL5P46777 297 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ETV1P50549 477 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 VWA3BQ502W6 1294 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 DCP2Q8IU60 420 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 RAVER1Q8IY67 606 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 IFNL3Q8IZI9 196 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 CENPSQ8N2Z9 138 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ENKURQ8TC29 256 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 SEPT1Q8WYJ6 367 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ANKS1AQ92625 1134 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 FAM167AQ96KS9 214 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 TRIM15Q9C019 465 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 GHITMQ9H3K2 345 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 HAUS4Q9H6D7 363 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ZNF287Q9HBT7 754 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 SYTL2Q9HCH5 934 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 ASNSD1Q9NWL6 643 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 PAQR5Q9NXK6 330 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 UBA2Q9UBT2 640 aaPredicted RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 CNOT8Q9UFF9 292 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 RNF112Q9ULX5 631 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 CACNG2Q9Y698 323 aa11.52□□□□□ -0.57
CCDC171-202ENST00000432954 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
CCDC171-202ENST00000432954 C1orf232A0A0U1RR37 186 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 OR5K3A6NET4 321 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 KRIT1O00522 736 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 E2F3O00716 465 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 BACH1O14867 736 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 ADCY6O43306 1168 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 SNX3O60493 162 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 GJB6O95452 261 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RAC2P15153 192 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 LONP1P36776 959 aaKnown RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 AK2P54819 239 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 PPP2R5CQ13362 524 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RWDD4Q6NW29 188 aaKnown RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 FAM180BQ6P0A1 224 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 NKAIN4Q8IVV8 208 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 ADSSL1Q8N142 457 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 BORCS5Q969J3 196 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 ARL5BQ96KC2 179 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 SH2D4AQ9H788 454 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 MMRN2Q9H8L6 949 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 INTS13Q9NVM9 706 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 NCKIPSDQ9NZQ3 722 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 NOB1Q9ULX3 412 aaKnown RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 MAPRE3Q9UPY8 281 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 STARD13Q9Y3M8 1113 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 USP15Q9Y4E8 981 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 CPDO75976 1380 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RAPGEF6Q8TEU7 1601 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 A0A0U1RQJ8 604 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 KPNA5O15131 536 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 RGS20O76081 388 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 ZBTB11O95625 1053 aaPredicted RBP11.51□□□□□ -0.57
CCDC171-202ENST00000432954 IFNA14P01570 189 aa11.51□□□□□ -0.57
CCDC171-202ENST00000432954 GUCY1A2P33402 732 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms