RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 GGA2Q9UJY4 613 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 CCPG1Q9ULG6 757 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 NEU2Q9Y3R4 380 aa7.67□□□□□ -1.18
COL28A1-202ENST00000430711 MGAMO43451 1857 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SRRM3A6NNA2 597 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SLC26A4O43511 780 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 RARGP13631 454 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CNGA1P29973 690 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 MAP2K2P36507 400 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 HSD17B4P51659 736 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 WDR4P57081 412 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 GTF2BQ00403 316 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 EFTUD2Q15029 972 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SNCBQ16143 134 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SGO2Q562F6 1265 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 WLSQ5T9L3 541 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TLDC1Q6P9B6 456 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 INTS8Q75QN2 995 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CYFIP1Q7L576 1253 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TRPM8Q7Z2W7 1104 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TAX1BP1Q86VP1 789 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SLC17A8Q8NDX2 589 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 C7orf43Q8WVR3 580 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SAE1Q9UBE0 346 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF70Q9UC06 446 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 ASIC3Q9UHC3 531 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 GTF3C4Q9UKN8 822 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 COL11A1P12107 1806 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 DENND3A2RUS2 1198 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 IGF2BP3O00425 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CHUKO15111 745 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 DNAJC8O75937 253 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 RGS20O76081 388 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 MTA2O94776 668 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 VNN1O95497 513 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 BCRP11274 1271 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 DRG2P55039 364 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 NCKAP1LP55160 1127 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 RPL7AP62424 266 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 RPS6P62753 249 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CDR2Q01850 454 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF252P-AS1Q0IIN9 211 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 PLCB4Q15147 1175 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SEL1L2Q5TEA6 688 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 NUGGCQ68CJ6 796 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CYP4F22Q6NT55 531 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 EP400NLQ6ZTU2 488 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 HOOK3Q86VS8 718 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SPATS2Q86XZ4 545 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SRRM1Q8IYB3 904 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 UBL4BQ8N7F7 174 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 CENPTQ96BT3 561 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TMEM237Q96Q45 408 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 C11orf70Q9BRQ4 267 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 FAM213AQ9BRX8 229 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF341Q9BYN7 854 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 KCNK9Q9NPC2 374 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 XPNPEP1Q9NQW7 623 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 ZNF277Q9NRM2 450 aaPredicted RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 SEL1LQ9UBV2 794 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TJP2Q9UDY2 1190 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 USTQ9Y2C2 406 aa7.66□□□□□ -1.18
COL28A1-202ENST00000430711 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.66□□□□□ -1.18
COL28A1-202ENST00000430711 UBE4BO95155 1302 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 A6NNZ2 444 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 FSCN2O14926 492 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 STBD1O95210 358 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 ECEL1O95672 775 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 AGTP01019 485 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 UNGP13051 313 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 ACOT2P49753 483 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 EIF3BP55884 814 aaKnown RBP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 OGDHQ02218 1023 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 KLF1Q13351 362 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 DRP2Q13474 957 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 MTMR1Q13613 665 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 CLEC16AQ2KHT3 1053 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 TUBB8Q3ZCM7 444 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 XKR9Q5GH70 373 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 ERICH1Q86X53 443 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 ECHDC2Q86YB7 292 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 N4BP2L2Q92802 583 aaPredicted RBP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 ACCSQ96QU6 501 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 RPS6KC1Q96S38 1066 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 WDR83Q9BRX9 315 aaKnown RBP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 DCLK3Q9C098 648 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 KDM4CQ9H3R0 1056 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 LRRC19Q9H756 370 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 YY1AP1Q9H869 796 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 NMRK2Q9NPI5 230 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.65□□□□□ -1.18
COL28A1-202ENST00000430711 EURLQ9NYK6 297 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 PGAP2Q9UHJ9 254 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 UBIAD1Q9Y5Z9 338 aa7.65□□□□□ -1.18
COL28A1-202ENST00000430711 LOXHD1Q8IVV2 1947 aa7.65□□□□□ -1.19
COL28A1-202ENST00000430711 TESPA1A2RU30 521 aaPredicted RBP7.64□□□□□ -1.19
COL28A1-202ENST00000430711 MIF4GDA9UHW6 222 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms