RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 RAB33AQ14088 237 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
HDAC4-202ENST00000430200 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 TIPINQ9BVW5 301 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 C17orf75Q9HAS0 396 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 FBXO2Q9UK22 296 aaPredicted RBP12.89□□□□□ -0.35
HDAC4-202ENST00000430200 NUMBLQ9Y6R0 609 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 PTPRDP23468 1912 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 GVINP1Q7Z2Y8 2422 aa12.89□□□□□ -0.35
HDAC4-202ENST00000430200 NCANO14594 1321 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 GREB1Q4ZG55 1949 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 A0A087X0B3 334 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 SEC24AO95486 1093 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 LAMP2P13473 410 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 MCM2P49736 904 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 PTPN5P54829 565 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 ELAVL2Q12926 359 aaKnown RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 DCLRE1AQ6PJP8 1040 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 PARM1Q6UWI2 310 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 ZPBP2Q6X784 338 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 HAUS6Q7Z4H7 955 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 SIX5Q8N196 739 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 SLC44A3Q8N4M1 653 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 ING5Q8WYH8 240 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 RAD54LQ92698 747 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 KCNN1Q92952 543 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 CDK5RAP3Q96JB5 506 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 UROC1Q96N76 676 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 FGFBP2Q9BYJ0 223 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 PIDD1Q9HB75 910 aa12.88□□□□□ -0.35
HDAC4-202ENST00000430200 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
HDAC4-202ENST00000430200 DNAH14Q0VDD8 3507 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 TTC26A0AVF1 554 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 K7ENM7 598 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 PIGRP01833 764 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 FSHRP23945 695 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 MARCKSP29966 332 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 HOXA9P31269 272 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 YARSP54577 528 aaKnown RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 WNT7BP56706 349 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 MRPL58Q14197 206 aaKnown RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 PPM1LQ5SGD2 360 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 SLC8B1Q6J4K2 584 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 CYP26C1Q6V0L0 522 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 NPAS3Q8IXF0 933 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 FLCNQ8NFG4 579 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 FGF13Q92913 245 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 FAM84AQ96KN4 292 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 AK8Q96MA6 479 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 CLIC6Q96NY7 704 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 CRISPLD1Q9H336 500 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 FOXD4L1Q9NU39 408 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 IGSF9Q9P2J2 1179 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 ODF2LQ9ULJ1 636 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.87□□□□□ -0.35
HDAC4-202ENST00000430200 BACE2Q9Y5Z0 518 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 MYO16Q9Y6X6 1858 aa12.87□□□□□ -0.35
HDAC4-202ENST00000430200 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
HDAC4-202ENST00000430200 ANAPC1Q9H1A4 1944 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 ANKRD63C9JTQ0 380 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
HDAC4-202ENST00000430200 CEBPBP17676 345 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 AOC1P19801 751 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 SYT1P21579 422 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 CCR2P41597 374 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 STRN3Q13033 797 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 SCARA3Q6AZY7 606 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 ZSWIM2Q8NEG5 633 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
HDAC4-202ENST00000430200 STAMQ92783 540 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 FBXL5Q9UKA1 691 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 MTMR6Q9Y217 621 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 ZNF638Q14966 1978 aaKnown RBP12.86□□□□□ -0.35
HDAC4-202ENST00000430200 RIF1Q5UIP0 2472 aaKnown RBP12.86□□□□□ -0.35
HDAC4-202ENST00000430200 FAM186AA6NE01 2351 aa12.86□□□□□ -0.35
HDAC4-202ENST00000430200 HNRNPDLO14979 420 aaKnown RBP12.85□□□□□ -0.35
HDAC4-202ENST00000430200 SPTLC1O15269 473 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms