RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 IRAK3Q9Y616 596 aa16.19■□□□□ 0.18
GARNL3-204ENST00000429629 PTPRSQ13332 1948 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 PIRO00625 290 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 B3GAT3O94766 335 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 NFICP08651 508 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
GARNL3-204ENST00000429629 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
GARNL3-204ENST00000429629 GTF2H1P32780 548 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 CASP4P49662 377 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 CLCNKBP51801 687 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 CEP135Q66GS9 1140 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 SPRED2Q7Z698 418 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 EFCAB13Q8IY85 973 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 FAM186BQ8IYM0 893 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 C18orf25Q96B23 403 aaPredicted RBP16.18■□□□□ 0.18
GARNL3-204ENST00000429629 GZF1Q9H116 711 aaPredicted RBP16.18■□□□□ 0.18
GARNL3-204ENST00000429629 CERS4Q9HA82 394 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 CHST7Q9NS84 486 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 DPP3Q9NY33 737 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
GARNL3-204ENST00000429629 EPOPA6NHQ4 379 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CASTOR2A6NHX0 329 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 NT5C1B-RDH14C9J2C7 533 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 PODXLO00592 558 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 GRM6O15303 877 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 C1RP00736 705 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 SOD2P04179 222 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 KRT13P13646 458 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 PNPLA4P41247 253 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 AARSP49588 968 aaKnown RBP eCLIP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 MARSP56192 900 aaKnown RBP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 WNT7BP56706 349 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CAMK1Q14012 370 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 NFKBIBQ15653 356 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 C9orf57Q5W0N0 161 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 KLHL10Q6JEL2 608 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CAVIN1Q6NZI2 390 aaKnown RBP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CD300LGQ6UXG3 332 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 FRMD5Q7Z6J6 570 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CSGALNACT2Q8N6G5 542 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 LRRC52Q8N7C0 313 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 POF1BQ8WVV4 589 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 ANKRD36BP1Q96IX9 119 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 GAS2L1Q99501 681 aaPredicted RBP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CDX2Q99626 313 aaPredicted RBP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 PRDM12Q9H4Q4 367 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 PRG3Q9Y2Y8 225 aaPredicted RBP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 SF3B1O75533 1304 aaKnown RBP eCLIP16.17■□□□□ 0.18
GARNL3-204ENST00000429629 CHD7Q9P2D1 2997 aa16.17■□□□□ 0.18
GARNL3-204ENST00000429629 ARHGEF37A1IGU5 675 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 FSCN2O14926 492 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 STX10O60499 249 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TNNC2P02585 160 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 CTSAP10619 480 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TNNI1P19237 187 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 PBX3P40426 434 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 VAMP7P51809 220 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 RBP5P82980 135 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TFAMQ00059 246 aaKnown RBP16.16■□□□□ 0.18
GARNL3-204ENST00000429629 SPAG1Q07617 926 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 BFSP1Q12934 665 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 USP41Q3LFD5 358 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 PDXDC1Q6P996 788 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TMEM173Q86WV6 379 aaPredicted RBP16.16■□□□□ 0.18
GARNL3-204ENST00000429629 CXorf38Q8TB03 319 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
GARNL3-204ENST00000429629 NOC3LQ8WTT2 800 aaKnown RBP16.16■□□□□ 0.18
GARNL3-204ENST00000429629 CCDC127Q96BQ5 260 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 PAAF1Q9BRP4 392 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 ALG13Q9NP73 1137 aaKnown RBP16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TLR9Q9NR96 1032 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 TUBGCP4Q9UGJ1 667 aa16.16■□□□□ 0.18
GARNL3-204ENST00000429629 FSD2A1L4K1 749 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 TRIM49BA6NDI0 452 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 SYN3O14994 580 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 PMM2O15305 246 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 LILRB3O75022 631 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 KIF4AO95239 1232 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
GARNL3-204ENST00000429629 FAM163BP0C2L3 166 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 TMEM191BP0C7N4 346 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 DLATP10515 647 aaKnown RBP16.15■□□□□ 0.18
GARNL3-204ENST00000429629 LILRA4P59901 499 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 STX1AQ16623 288 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 FUT10Q6P4F1 479 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 TRAPPC11Q7Z392 1133 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 VPS52Q8N1B4 723 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 MRPL43Q8N983 215 aaKnown RBP16.15■□□□□ 0.18
GARNL3-204ENST00000429629 C1orf127Q8N9H9 656 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 BCL7CQ8WUZ0 217 aaPredicted RBP16.15■□□□□ 0.18
GARNL3-204ENST00000429629 SUSD3Q96L08 255 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 GUCD1Q96NT3 240 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 MED15Q96RN5 788 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 HERC2P3Q9BVR0 1158 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
GARNL3-204ENST00000429629 ARMCX3Q9UH62 379 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms