RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 RBM15Q96T37 977 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■□□□ 12.6
RHBDF1-204ENST00000428730 P2RX7Q99572 595 aaKnown RBP17.42■□□□□ 0.38
RHBDF1-204ENST00000428730 CCDC77Q9BR77 488 aa17.42■□□□□ 0.38
RHBDF1-204ENST00000428730 LRRC4BQ9NT99 713 aa17.42■□□□□ 0.38
RHBDF1-204ENST00000428730 C2CD2LO14523 706 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 SF3B3Q15393 1217 aaKnown RBP17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 HHATQ5VTY9 493 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 STMN2Q93045 179 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 MCUR1Q96AQ8 359 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 PTCD3Q96EY7 689 aaKnown RBP17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 ATF5Q9Y2D1 282 aaPredicted RBP17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 ARFGEF1Q9Y6D6 1849 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 CREB3O43889 395 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 SORBS3O60504 671 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 CCDC22O60826 627 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 CALCAP01258 141 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 BTDP43251 543 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 MAGEA4P43358 317 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 RPS8P62241 208 aaKnown RBP17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 TTC7BQ86TV6 843 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 VPS52Q8N1B4 723 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 PPFIBP2Q8ND30 876 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 SPATA16Q9BXB7 569 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 DCLK3Q9C098 648 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 PREBQ9HCU5 417 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 SAYSD1Q9NPB0 183 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 HEY2Q9UBP5 337 aa17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 RPL26L1Q9UNX3 145 aaKnown RBP17.41■□□□□ 0.38
RHBDF1-204ENST00000428730 DDX60LQ5H9U9 1706 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ZBED4O75132 1171 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 HAUS5O94927 633 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 CCNFP41002 786 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 SLC47A2Q86VL8 602 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 KLHL23Q8NBE8 558 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 OPTNQ96CV9 577 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 SMC6Q96SB8 1091 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 MAK16Q9BXY0 300 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 PDP2Q9P2J9 529 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 GAS8O95995 478 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ADRA1DP25100 572 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 RPA1P27694 616 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 CETN2P41208 172 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 RGS9BPQ6ZS82 235 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 PDCD7Q8N8D1 485 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ETNPPLQ8TBG4 499 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ANO3Q9BYT9 981 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 SYNCQ9H7C4 482 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 CHCHD3Q9NX63 227 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 TISP43B9A030 160 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 PRPF4O43172 522 aaKnown RBP eCLIP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 TAL1P17542 331 aaPredicted RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 PABPC1LQ4VXU2 614 aaKnown RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ASPRV1Q53RT3 343 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 PCNX4Q63HM2 1172 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 IZUMO2Q6UXV1 221 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 EPS8L1Q8TE68 723 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 RTFDC1Q9BY42 306 aaPredicted RBP17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 FAM192AQ9GZU8 254 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 SAR1AQ9NR31 198 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 AGPAT3Q9NRZ7 376 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 TAS2R1Q9NYW7 299 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 FRMD4BQ9Y2L6 1034 aa17.4■□□□□ 0.38
RHBDF1-204ENST00000428730 CYP26A1O43174 497 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 RAD21O60216 631 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 USP1O94782 785 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 FAM13AO94988 1023 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 PLS3P13797 630 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 AKR1B1P15121 316 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 SERPINB3P29508 390 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 PSMC4P43686 418 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 ITPK1Q13572 414 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 LLGL2Q6P1M3 1020 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 GLIS1Q8NBF1 620 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 ARMCX1Q9P291 453 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 EMSYQ7Z589 1322 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 EML1O00423 815 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 GCLMP48507 274 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 MYBPC3Q14896 1274 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 RINT1Q6NUQ1 792 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 FBXO27Q8NI29 283 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 KLF6Q99612 283 aaPredicted RBP17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 RABGAP1Q9Y3P9 1069 aa17.39■□□□□ 0.37
RHBDF1-204ENST00000428730 BCRP11274 1271 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 INHBCP55103 352 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 ZNF543Q08ER8 600 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 BFSP1Q12934 665 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 NR1H3Q13133 447 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 C2CD6Q53TS8 623 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 FYB2Q5VWT5 728 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 DPP8Q6V1X1 898 aaPredicted RBP17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 CYP2W1Q8TAV3 490 aa17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 ASCC2Q9H1I8 757 aaPredicted RBP17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 NOCTQ9UK39 431 aaKnown RBP17.38■□□□□ 0.37
RHBDF1-204ENST00000428730 PHF24Q9UPV7 400 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms