RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 CHD7Q9P2D1 2997 aa15.77■□□□□ 0.12
SGCE-204ENST00000428696 I3L4J1 428 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 TNNC2P02585 160 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 ADRB2P07550 413 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 TMEM191BP0C7N4 346 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 PTMSP20962 102 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 IGFBP6P24592 240 aaPredicted RBP15.77■□□□□ 0.11
SGCE-204ENST00000428696 RPL9P32969 192 aaKnown RBP15.77■□□□□ 0.11
SGCE-204ENST00000428696 PMS1P54277 932 aaKnown RBP15.77■□□□□ 0.11
SGCE-204ENST00000428696 WNT7BP56706 349 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 PLCB3Q01970 1234 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 CYP24A1Q07973 514 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 NAB2Q15742 525 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 TAS1R1Q7RTX1 841 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 FAM186BQ8IYM0 893 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 CSGALNACT2Q8N6G5 542 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 AUTS2Q8WXX7 1259 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 SYAP1Q96A49 352 aaPredicted RBP15.77■□□□□ 0.11
SGCE-204ENST00000428696 MRPL38Q96DV4 380 aaKnown RBP15.77■□□□□ 0.11
SGCE-204ENST00000428696 B3GALT6Q96L58 329 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 IGFLR1Q9H665 355 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 DMAC2Q9NW81 257 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 ADAM28Q9UKQ2 775 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 DERAQ9Y315 318 aa15.77■□□□□ 0.11
SGCE-204ENST00000428696 CDH23Q9H251 3354 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 PHACTR2O75167 634 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 KRT13P13646 458 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 CCNE1P24864 410 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 IRS1P35568 1242 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 UBE3AQ05086 875 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 PAK1Q13153 545 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 SURF1Q15526 300 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 ZBTB6Q15916 424 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 UPP1Q16831 310 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 TPD52L1Q16890 204 aaPredicted RBP15.76■□□□□ 0.11
SGCE-204ENST00000428696 DUOXA2Q1HG44 320 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 FAM171A1Q5VUB5 890 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 CENPPQ6IPU0 288 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
SGCE-204ENST00000428696 EFCAB13Q8IY85 973 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 MLKLQ8NB16 471 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 ANKRD36BP1Q96IX9 119 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 TSPAN18Q96SJ8 248 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 GPR62Q9BZJ7 368 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 MMRN2Q9H8L6 949 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 MARCH5Q9NX47 278 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 MTCH2Q9Y6C9 303 aa15.76■□□□□ 0.11
SGCE-204ENST00000428696 BICDL2A1A5D9 508 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 TRAPPC3O43617 180 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 AKAP3O75969 853 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 PSMC2P35998 433 aaKnown RBP15.75■□□□□ 0.11
SGCE-204ENST00000428696 BRCC3P46736 316 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 NLRP12P59046 1061 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 FKBP3Q00688 224 aaKnown RBP15.75■□□□□ 0.11
SGCE-204ENST00000428696 POU5F1Q01860 360 aaKnown RBP15.75■□□□□ 0.11
SGCE-204ENST00000428696 LRRC63Q05C16 580 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 PSMD6Q15008 389 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 COBLL1Q53SF7 1204 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 FUT10Q6P4F1 479 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 DSTYKQ6XUX3 929 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 SLC9A9Q8IVB4 645 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 FBXL18Q96ME1 805 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 TMEM63CQ9P1W3 806 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 AGAP1Q9UPQ3 857 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 LZTS1Q9Y250 596 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 C2CD2Q9Y426 696 aa15.75■□□□□ 0.11
SGCE-204ENST00000428696 SF3B1O75533 1304 aaKnown RBP eCLIP15.75■□□□□ 0.11
SGCE-204ENST00000428696 PER2O15055 1255 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 ITGB3P05106 788 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 EPB41P11171 864 aaKnown RBP15.74■□□□□ 0.11
SGCE-204ENST00000428696 CYP3A5P20815 502 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 MYBPC2Q14324 1141 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 DPCR1Q3MIW9 517 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 C9orf57Q5W0N0 161 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 OR5B17Q8NGF7 314 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 MFSD14AQ96MC6 490 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 LMAN2LQ9H0V9 348 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 TLE6Q9H808 572 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 MRPL17Q9NRX2 175 aaKnown RBP15.74■□□□□ 0.11
SGCE-204ENST00000428696 DACH1Q9UI36 760 aa15.74■□□□□ 0.11
SGCE-204ENST00000428696 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 PPEF2O14830 753 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 URODP06132 367 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 POLR2BP30876 1174 aaKnown RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 VAMP7P51809 220 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 DLG4P78352 724 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 BIRC3Q13489 604 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 CAMK1Q14012 370 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 SMC1AQ14683 1233 aaKnown RBP15.73■□□□□ 0.11
SGCE-204ENST00000428696 USP41Q3LFD5 358 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 CCDC40Q4G0X9 1142 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 ZCWPW2Q504Y3 356 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 TCERG1LQ5VWI1 586 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 USP37Q86T82 979 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 NT5DC4Q86YG4 428 aa15.73■□□□□ 0.11
SGCE-204ENST00000428696 C3orf58Q8NDZ4 430 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms