RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 FIZ1Q96SL8 496 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 NUB1Q9Y5A7 615 aa20.08■□□□□ 0.81
PSPC1-202ENST00000427943 TSC2P49815 1807 aa20.08■□□□□ 0.8
PSPC1-202ENST00000427943 CCL16O15467 120 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 PIGRP01833 764 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 CLTAP09496 248 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 DDIT3P35638 169 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 VCPP55072 806 aaKnown RBP20.07■□□□□ 0.8
PSPC1-202ENST00000427943 RAB33AQ14088 237 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 PPM1LQ5SGD2 360 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 ANKS3Q6ZW76 656 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 DYMQ7RTS9 669 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 SLC7A14Q8TBB6 771 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 KCNN1Q92952 543 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 CCDC39Q9UFE4 941 aa20.07■□□□□ 0.8
PSPC1-202ENST00000427943 MCM4P33991 863 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 TXLNAP40222 546 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 NTHL1P78549 312 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 ZC2HC1CQ53FD0 456 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-202ENST00000427943 VARS2Q5ST30 1063 aaKnown RBP20.06■□□□□ 0.8
PSPC1-202ENST00000427943 IER5LQ5T953 404 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 RRAGBQ5VZM2 374 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 SLC39A4Q6P5W5 647 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 GRASPQ7Z6J2 395 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-202ENST00000427943 SFR1Q86XK3 245 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 KRI1Q8N9T8 703 aaKnown RBP20.06■□□□□ 0.8
PSPC1-202ENST00000427943 RSAD2Q8WXG1 361 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 KIF12Q96FN5 646 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 ZSCAN16Q9H4T2 348 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-202ENST00000427943 KCNK12Q9HB15 430 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 POLIQ9UNA4 740 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 BACE2Q9Y5Z0 518 aa20.06■□□□□ 0.8
PSPC1-202ENST00000427943 TTC26A0AVF1 554 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 OGTO15294 1046 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 FAM189A1O60320 539 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 RPL9P32969 192 aaKnown RBP20.05■□□□□ 0.8
PSPC1-202ENST00000427943 PPP2R3AQ06190 1150 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 TDGQ13569 410 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 AXDND1Q5T1B0 1012 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-202ENST00000427943 MAP4K3Q8IVH8 894 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 PRSS33Q8NF86 280 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 KCNH6Q9H252 994 aa20.05■□□□□ 0.8
PSPC1-202ENST00000427943 SCN1AP35498 2009 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 LACTBL1A8MY62 500 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 TISP43B9A030 160 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 HNRNPA1P09651 372 aaKnown RBP eCLIP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 SCP2P22307 547 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 HOXA9P31269 272 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 GUCY2FP51841 1108 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 ARPP19P56211 112 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 GTF2BQ00403 316 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 ROR1Q01973 937 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 SLC39A14Q15043 492 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 ENOX2Q16206 610 aaKnown RBP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 ST13P5Q8NFI4 369 aaPredicted RBP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 DDX12PQ92771 950 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 FAM212AQ96EL1 285 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 SUSD3Q96L08 255 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 MSTO1Q9BUK6 570 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 IKZF4Q9H2S9 585 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 RPF1Q9H9Y2 349 aaKnown RBP20.04■□□□□ 0.8
PSPC1-202ENST00000427943 PLEKHA5Q9HAU0 1116 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 EPS15L1Q9UBC2 864 aa20.04■□□□□ 0.8
PSPC1-202ENST00000427943 A0A087X0B3 334 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 A0A0B4J269 797 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 MYMKA6NI61 221 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 ANKRD63C9JTQ0 380 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 SYN3O14994 580 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 NARSO43776 548 aaKnown RBP20.03■□□□□ 0.8
PSPC1-202ENST00000427943 XYLBO75191 536 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 FSHRP23945 695 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 NHLH1Q02575 133 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 SNX21Q969T3 373 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 PANK2Q9BZ23 570 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 HCFC1R1Q9NWW0 138 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 IGSF9Q9P2J2 1179 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 UBQLN1Q9UMX0 589 aaKnown RBP20.03■□□□□ 0.8
PSPC1-202ENST00000427943 DUSP12Q9UNI6 340 aa20.03■□□□□ 0.8
PSPC1-202ENST00000427943 WDR27A2RRH5 827 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 AVPR2P30518 371 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 LRPAP1P30533 357 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 STAT6P42226 847 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 NASPP49321 788 aaPredicted RBP20.02■□□□□ 0.8
PSPC1-202ENST00000427943 STK38Q15208 465 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 KYAT1Q16773 422 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 SLC8B1Q6J4K2 584 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 SV2BQ7L1I2 683 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 HSCBQ8IWL3 235 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 PDILTQ8N807 584 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 DNAJC19Q96DA6 116 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.02■□□□□ 0.8
PSPC1-202ENST00000427943 TBC1D7Q9P0N9 293 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 FBXL5Q9UKA1 691 aa20.02■□□□□ 0.8
PSPC1-202ENST00000427943 MORC2Q9Y6X9 1032 aaPredicted RBP20.02■□□□□ 0.8
PSPC1-202ENST00000427943 H7C4K7 107 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 LAMP2P13473 410 aa20.01■□□□□ 0.79
PSPC1-202ENST00000427943 ABCD1P33897 745 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms