RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ADAM2Q99965 735 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 WNT8AQ9H1J5 351 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 APOBEC3GQ9HC16 384 aaKnown RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 UBE2TQ9NPD8 197 aaPredicted RBP13.01□□□□□ -0.33
RFC4-206ENST00000427785 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 CHST12Q9NRB3 414 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 CNTN3Q9P232 1028 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 TUBGCP4Q9UGJ1 667 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 SQORQ9Y6N5 450 aa13.01□□□□□ -0.33
RFC4-206ENST00000427785 PITPNM1O00562 1244 aa13□□□□□ -0.33
RFC4-206ENST00000427785 NBNO60934 754 aa13□□□□□ -0.33
RFC4-206ENST00000427785 ITGB3P05106 788 aa13□□□□□ -0.33
RFC4-206ENST00000427785 PLEKP08567 350 aaPredicted RBP13□□□□□ -0.33
RFC4-206ENST00000427785 KRT19P08727 400 aa13□□□□□ -0.33
RFC4-206ENST00000427785 ITGA4P13612 1032 aa13□□□□□ -0.33
RFC4-206ENST00000427785 ATF7P17544 494 aaPredicted RBP13□□□□□ -0.33
RFC4-206ENST00000427785 POLR2BP30876 1174 aaKnown RBP13□□□□□ -0.33
RFC4-206ENST00000427785 MLH1P40692 756 aa13□□□□□ -0.33
RFC4-206ENST00000427785 RAB27AP51159 221 aa13□□□□□ -0.33
RFC4-206ENST00000427785 MYL6P60660 151 aa13□□□□□ -0.33
RFC4-206ENST00000427785 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
RFC4-206ENST00000427785 TRPC3Q13507 836 aa13□□□□□ -0.33
RFC4-206ENST00000427785 MEA1Q16626 185 aa13□□□□□ -0.33
RFC4-206ENST00000427785 TSR1Q2NL82 804 aaKnown RBP13□□□□□ -0.33
RFC4-206ENST00000427785 ZNF699Q32M78 642 aa13□□□□□ -0.33
RFC4-206ENST00000427785 TDRD12Q587J7 1177 aaKnown RBP13□□□□□ -0.33
RFC4-206ENST00000427785 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
RFC4-206ENST00000427785 RAD9BQ6WBX8 426 aa13□□□□□ -0.33
RFC4-206ENST00000427785 SCARA5Q6ZMJ2 495 aa13□□□□□ -0.33
RFC4-206ENST00000427785 HELQQ8TDG4 1101 aa13□□□□□ -0.33
RFC4-206ENST00000427785 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
RFC4-206ENST00000427785 KREMEN1Q96MU8 473 aa13□□□□□ -0.33
RFC4-206ENST00000427785 CHP1Q99653 195 aa13□□□□□ -0.33
RFC4-206ENST00000427785 GPR88Q9GZN0 384 aa13□□□□□ -0.33
RFC4-206ENST00000427785 ZNHIT6Q9NWK9 470 aaKnown RBP13□□□□□ -0.33
RFC4-206ENST00000427785 FBXL5Q9UKA1 691 aa13□□□□□ -0.33
RFC4-206ENST00000427785 C2CD2Q9Y426 696 aa13□□□□□ -0.33
RFC4-206ENST00000427785 MYH10P35580 1976 aa13□□□□□ -0.33
RFC4-206ENST00000427785 KIAA1671Q9BY89 1806 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 ARHGAP6O43182 974 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 ZC3H11AO75152 810 aaKnown RBP eCLIP12.99□□□□□ -0.33
RFC4-206ENST00000427785 GFPT2O94808 682 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 CYP2C18P33260 490 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 SOX5P35711 763 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 CCL23P55773 120 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 GPNMBQ14956 572 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 TCTN1Q2MV58 587 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 TOGARAM2Q6ZUX3 1019 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 CD302Q8IX05 232 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 HACE1Q8IYU2 909 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 ZFP42Q96MM3 310 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 DESI2Q9BSY9 194 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 IMPG2Q9BZV3 1241 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 PLEKHA5Q9HAU0 1116 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 DPP3Q9NY33 737 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 TBX21Q9UL17 535 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 DAAM1Q9Y4D1 1078 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 NUB1Q9Y5A7 615 aa12.99□□□□□ -0.33
RFC4-206ENST00000427785 PTGESO14684 152 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 PPEF2O14830 753 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 ASS1P00966 412 aaKnown RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 CST3P01034 146 aaPredicted RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 CLTBP09497 229 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 MSNP26038 577 aaKnown RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 HNRNPH3P31942 346 aaKnown RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 STAT1P42224 750 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 C1orf53Q5VUE5 145 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 ALKAL1Q6UXT8 129 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 NT5DC4Q86YG4 428 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 CXorf38Q8TB03 319 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 TOX2Q96NM4 488 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 GAD1Q99259 594 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 STK33Q9BYT3 514 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 NIF3L1Q9GZT8 377 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 XYLT2Q9H1B5 865 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
RFC4-206ENST00000427785 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 ITGA11Q9UKX5 1188 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 POLIQ9UNA4 740 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 DERAQ9Y315 318 aa12.98□□□□□ -0.33
RFC4-206ENST00000427785 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 ESPNB1AK53 854 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 EVI5O60447 810 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 SERPING1P05155 500 aa12.97□□□□□ -0.33
RFC4-206ENST00000427785 EIF4A3P38919 411 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms