RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ADCK5Q3MIX3 580 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 CENPPQ6IPU0 288 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 STYK1Q6J9G0 422 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 TMC7Q7Z402 723 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 GPD1LQ8N335 351 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 LPAR1Q92633 364 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 ZNF668Q96K58 619 aaPredicted RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 TUBGCP2Q9BSJ2 902 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 XPO4Q9C0E2 1151 aaKnown RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 FHOD1Q9Y613 1164 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 ITIH6Q6UXX5 1313 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 IGSF1Q8N6C5 1336 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 B3GALNT1O75752 331 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 BMP10O95393 424 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 CTSEP14091 401 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 RASA1P20936 1047 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 ATP6V1C1P21283 382 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 GCLCP48506 637 aaPredicted RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 SUSD4Q5VX71 490 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 UGT3A1Q6NUS8 523 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 ZNF544Q6NX49 715 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 DNAJC14Q6Y2X3 702 aaPredicted RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 TBC1D1Q86TI0 1168 aaPredicted RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 RNF135Q8IUD6 432 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 RASGRP4Q8TDF6 673 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 MRPL48Q96GC5 212 aaKnown RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 DYDC2Q96IM9 177 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 DHX35Q9H5Z1 703 aaKnown RBP6.03□□□□□ -1.44
HERC4-206ENST00000427635 CAPN7Q9Y6W3 813 aa6.03□□□□□ -1.44
HERC4-206ENST00000427635 ARPC4-TTLL3A0A0A6YYG9 625 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 MYMKA6NI61 221 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 MEI4A8MW99 385 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 H3BRB1 525 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SPTLC1O15269 473 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SERPING1P05155 500 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CYP2C9P11712 490 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 GNA15P30679 374 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 AVPR1AP37288 418 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 GMPSP49915 693 aaPredicted RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 SCNN1BP51168 640 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CNTN1Q12860 1018 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 PPM1LQ5SGD2 360 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ZNF658Q5TYW1 1059 aaPredicted RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 SPATA1Q5VX52 437 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 NOTUMQ6P988 496 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 FOXR1Q6PIV2 292 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 TMEM270Q6UE05 265 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SRLQ86TD4 932 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 LUZP2Q86TE4 346 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 TTC17Q96AE7 1141 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 TUT1Q9H6E5 874 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 DNAJC12Q9UKB3 198 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 COPG1Q9Y678 874 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 HEG1Q9ULI3 1381 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 KDM6AO15550 1401 aaPredicted RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 CCDC163A0A0D9SF12 145 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ORC4O43929 436 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 KRT37O76014 449 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 IL18RAPO95256 599 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ASS1P00966 412 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 MYBL2P10244 700 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 COPB1P53618 953 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 CSE1LP55060 971 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 ABCE1P61221 599 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 PASD1Q8IV76 773 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SIX5Q8N196 739 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 RNF149Q8NC42 400 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ARMC2Q8NEN0 867 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CHST13Q8NET6 341 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 FAM161BQ96MY7 647 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 TIPINQ9BVW5 301 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 RASSF4Q9H2L5 321 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 RETREG1Q9H6L5 497 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ACTR5Q9H9F9 607 aaPredicted RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 CD209Q9NNX6 404 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 AASDHPPTQ9NRN7 309 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 INSRP06213 1382 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 EXOC1LA0A1B0GW35 172 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 LRRC14BA6NHZ5 514 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SNTNA6NMZ2 147 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CHL1O00533 1208 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 KIAA0391O15091 583 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 POMCP01189 267 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 MPOP05164 745 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ZNF24P17028 368 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 CHRNA3P32297 505 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 RWDD2BP57060 319 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 PPP4CP60510 307 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 SKP1P63208 163 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 FKBP3Q00688 224 aaKnown RBP6.02□□□□□ -1.45
HERC4-206ENST00000427635 EHHADHQ08426 723 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 PEX6Q13608 980 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 MORF4L2Q15014 288 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 ZNF284Q2VY69 593 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 RABGAP1LQ5R372 815 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
HERC4-206ENST00000427635 PRR23CQ6ZRP0 262 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms