RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 A8MX80 341 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 GOLGA8NF8WBI6 632 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 POLE2P56282 527 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 TRIM28Q13263 835 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 SGMS1Q86VZ5 419 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 TCN1P20061 433 aaPredicted RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 NR1D1P20393 614 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 CLCN6P51797 869 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 EFTUD2Q15029 972 aaKnown RBP eCLIP13.87□□□□□ -0.19
SPG11-202ENST00000427534 DGKDQ16760 1214 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 ACAD11Q709F0 780 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 SCG3Q8WXD2 468 aaKnown RBP13.87□□□□□ -0.19
SPG11-202ENST00000427534 BTBD6Q96KE9 485 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 ZNF560Q96MR9 790 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 MAD2L2Q9UI95 211 aa13.87□□□□□ -0.19
SPG11-202ENST00000427534 MYO1GB0I1T2 1018 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 EEF2KO00418 725 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 TADA3O75528 432 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 ITGB3P05106 788 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 PDCLQ13371 301 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 METTL5Q9NRN9 209 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 APOBEC2Q9Y235 224 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 PNPLA7Q6ZV29 1317 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 PJA2O43164 708 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 TIMM13Q9Y5L4 95 aaPredicted RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 C17orf102A2RUQ5 167 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 DGKIO75912 1065 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 DDX5P17844 614 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 TYK2P29597 1187 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 MAGOHP61326 146 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 KRT17Q04695 432 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 FLOT2Q14254 428 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 ATF7IP2Q5U623 682 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 STOX1Q6ZVD7 989 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 MAGED4Q96JG8 741 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 UNKQ9C0B0 810 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 SMARCAD1Q9H4L7 1026 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 RUBCNLQ9H714 662 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 CD274Q9NZQ7 290 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 CCDC85CA6NKD9 419 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 PDHA1P08559 390 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 NCOA4Q13772 614 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 GLB1LQ6UWU2 654 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 RNF180Q86T96 592 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 TRIM4Q9C037 500 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 MTIF3Q9H2K0 278 aaKnown RBP13.86□□□□□ -0.19
SPG11-202ENST00000427534 CRB1P82279 1406 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
SPG11-202ENST00000427534 TRAPPC3O43617 180 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 TBXAS1P24557 533 aaPredicted RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 CEP55Q53EZ4 464 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 ARMC6Q6NXE6 501 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 DHX40Q8IX18 779 aaKnown RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 PROM2Q8N271 834 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 FAM20AQ96MK3 541 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 ORC4O43929 436 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 SKAP2O75563 359 aaPredicted RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 CETPP11597 493 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 HMOX2P30519 316 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 ORC2Q13416 577 aaPredicted RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 RHOT2Q8IXI1 618 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 CCDC124Q96CT7 223 aaKnown RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 TFR2Q9UP52 801 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 TAF11Q15544 211 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 KATNAL1Q9BW62 490 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 GPRC5CQ9NQ84 441 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 PARVAQ9NVD7 372 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 TMEM161AQ9NX61 479 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 TRIM10Q9UDY6 481 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 SERPINI2O75830 405 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 KRT37O76014 449 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 MYL4P12829 197 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 SCP2P22307 547 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 MTF1Q14872 753 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 MORF4L2Q15014 288 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 FAXCQ5TGI0 409 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 CCDC137Q6PK04 289 aaKnown RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 TNIP3Q96KP6 325 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 EFHD1Q9BUP0 239 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 SYTL2Q9HCH5 934 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 EPHX2P34913 555 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 IZUMO3Q5VZ72 239 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 MAGEB5Q9BZ81 275 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 NPM3O75607 178 aaKnown RBP13.85□□□□□ -0.19
SPG11-202ENST00000427534 MYO1DO94832 1006 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 NR3C2P08235 984 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 PMS2P54278 862 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 DEUP1Q05D60 604 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 STRIP1Q5VSL9 837 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 ING2Q9H160 280 aa13.85□□□□□ -0.19
SPG11-202ENST00000427534 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms