RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 C3orf58Q8NDZ4 430 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 BEST2Q8NFU1 509 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 AUTS2Q8WXX7 1259 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 CDCA3Q99618 268 aaPredicted RBP27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 GTPBP4Q9BZE4 634 aaKnown RBP27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 TLE6Q9H808 572 aa27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 SPTBN5Q9NRC6 3674 aaKnown RBP27.28■■□□□ 1.96
HERPUD2-205ENST00000427455 BRWD1Q9NSI6 2320 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 ZNF233A6NK53 670 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 GLUD2P49448 558 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 USP41Q3LFD5 358 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 ZNF658Q5TYW1 1059 aaPredicted RBP27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 SPATA1Q5VX52 437 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 TAS1R1Q7RTX1 841 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 RBM23Q86U06 439 aaKnown RBP27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 CBWD2Q8IUF1 395 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 PABPC5Q96DU9 382 aaKnown RBP27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 MRPL17Q9NRX2 175 aaKnown RBP27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 CHST7Q9NS84 486 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 COG5Q9UP83 839 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 SSX2IPQ9Y2D8 614 aa27.27■■□□□ 1.96
HERPUD2-205ENST00000427455 DSG1Q02413 1049 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 SNRNP35Q16560 246 aaKnown RBP27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 DUSP6Q16828 381 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 KIAA1841Q6NSI8 718 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 EFCAB13Q8IY85 973 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 SMYD4Q8IYR2 804 aaPredicted RBP27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 TMEM174Q8WUU8 243 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 HLA-CQ95604 372 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 LMBRD1Q9NUN5 540 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 THEGQ9P2T0 379 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 MAPK8IP1Q9UQF2 711 aa27.26■■□□□ 1.95
HERPUD2-205ENST00000427455 GOLGA6L22H0YM25 854 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 TRAPPC3O43617 180 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 CALUO43852 315 aaPredicted RBP27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 GTF2F1P35269 517 aaKnown RBP eCLIP27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 GUCY2FP51841 1108 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 WNT7BP56706 349 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 COBLL1Q53SF7 1204 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 FAM171A1Q5VUB5 890 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 CD300LGQ6UXG3 332 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 SLC9A9Q8IVB4 645 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 GPR65Q8IYL9 337 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 EFHBQ8N7U6 833 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 IGFLR1Q9H665 355 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 UBE2ZQ9H832 354 aaPredicted RBP27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 PRDM6Q9NQX0 595 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 TRAF3IP3Q9Y228 551 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 NUB1Q9Y5A7 615 aa27.25■■□□□ 1.95
HERPUD2-205ENST00000427455 PER2O15055 1255 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 LILRB3O75022 631 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 IGFBP6P24592 240 aaPredicted RBP27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 SURF1Q15526 300 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 CTC1Q2NKJ3 1217 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 KIAA0319Q5VV43 1072 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 B3GALT6Q96L58 329 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 PDE11AQ9HCR9 933 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 CLDND1Q9NY35 253 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 XIRP2A4UGR9 3374 aa27.24■■□□□ 1.95
HERPUD2-205ENST00000427455 C2CD2LO14523 706 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 EXOC3O60645 756 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 NR3C1P04150 777 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 MYBPC2Q14324 1141 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 RTP2Q5QGT7 225 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 TMEM130Q8N3G9 435 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 TTPALQ9BTX7 342 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 EMILIN2Q9BXX0 1053 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 DMAC2Q9NW81 257 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 MAN1B1Q9UKM7 699 aa27.23■■□□□ 1.95
HERPUD2-205ENST00000427455 TULP1O00294 542 aaPredicted RBP27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 BRCC3P46736 316 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 TFAMQ00059 246 aaKnown RBP27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 CREMQ03060 361 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 NFIL3Q16649 462 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 C9orf57Q5W0N0 161 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 RDH13Q8NBN7 331 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 RIN2Q8WYP3 895 aaPredicted RBP27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 DPP3Q9NY33 737 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 VWA8A3KMH1 1905 aa27.22■■□□□ 1.95
HERPUD2-205ENST00000427455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 LINC01565O15544 149 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 FGFR3P22607 806 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 MCM4P33991 863 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 PRCPP42785 496 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 CYP24A1Q07973 514 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 ADAM15Q13444 863 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 ZCWPW2Q504Y3 356 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 PDXDC1Q6P996 788 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 CEP57Q86XR8 500 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 CACTINQ8WUQ7 758 aaKnown RBP27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 PIK3R5Q8WYR1 880 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 RXFP1Q9HBX9 757 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 UNC80Q8N2C7 3258 aa27.21■■□□□ 1.95
HERPUD2-205ENST00000427455 ANO9A1A5B4 782 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 I3L4J1 428 aa27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 CLASP2O75122 1294 aaKnown RBP27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 CNPP09543 421 aaKnown RBP27.2■■□□□ 1.94
HERPUD2-205ENST00000427455 PSMD6Q15008 389 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms