RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 LMCD1Q9NZU5 365 aa13.6□□□□□ -0.23
SMIM12-203ENST00000426886 NUB1Q9Y5A7 615 aa13.6□□□□□ -0.23
SMIM12-203ENST00000426886 PPEF2O14830 753 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 KIF20AO95235 890 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 BMP6P22004 513 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 CASP4P49662 377 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 FAM171A1Q5VUB5 890 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 GUF1Q8N442 669 aaKnown RBP13.59□□□□□ -0.23
SMIM12-203ENST00000426886 TLE6Q9H808 572 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 UBQLN1Q9UMX0 589 aaKnown RBP13.59□□□□□ -0.23
SMIM12-203ENST00000426886 LZTS1Q9Y250 596 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 BRWD1Q9NSI6 2320 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 TDRD15B5MCY1 1934 aaKnown RBP13.59□□□□□ -0.23
SMIM12-203ENST00000426886 PDXKO00764 312 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 NR3C1P04150 777 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 ADRB2P07550 413 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 ZBTB6Q15916 424 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 SCARA3Q6AZY7 606 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 DCLRE1AQ6PJP8 1040 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 BRSK2Q8IWQ3 736 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 ASB7Q9H672 318 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
SMIM12-203ENST00000426886 COL4A4P53420 1690 aaPredicted RBP13.58□□□□□ -0.23
SMIM12-203ENST00000426886 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CD302Q8IX05 232 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 ELOA2Q8IYF1 753 aaPredicted RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 MRPL43Q8N983 215 aaKnown RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 BEST2Q8NFU1 509 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 ZBP1Q9H171 429 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 NGRNQ9NPE2 291 aaKnown RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 PLXNA4Q9HCM2 1894 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CALUO43852 315 aaPredicted RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 SOD2P04179 222 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 RPL17P18621 184 aaKnown RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 PRSS55Q6UWB4 352 aaPredicted RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 GOLGA5Q8TBA6 731 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 RIN2Q8WYP3 895 aaPredicted RBP13.58□□□□□ -0.24
SMIM12-203ENST00000426886 NUP62CLQ9H1M0 184 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 CITO14578 2027 aa13.58□□□□□ -0.24
SMIM12-203ENST00000426886 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.246e-6■■■■■ 103.4
SMIM12-203ENST00000426886 RALGAPA2Q2PPJ7 1873 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 LINC01565O15544 149 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 URODP06132 367 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 KRT19P08727 400 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 CTSAP10619 480 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 TNNI1P19237 187 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 NR2F2P24468 414 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 MCM4P33991 863 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 PMS1P54277 932 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 HYAL1Q12794 435 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 ADAM9Q13443 819 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 SMC1AQ14683 1233 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 RTP2Q5QGT7 225 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 UROC1Q96N76 676 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 MTMR12Q9C0I1 747 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 MRPL17Q9NRX2 175 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 CLDND1Q9NY35 253 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 TIMM13Q9Y5L4 95 aaPredicted RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 PTPRJQ12913 1337 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 IL18RAPO95256 599 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 STX17P56962 302 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 SNRPFP62306 86 aaKnown RBP13.57□□□□□ -0.24
SMIM12-203ENST00000426886 TFF2Q03403 129 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 USP41Q3LFD5 358 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 OR5B17Q8NGF7 314 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 FNBP1Q96RU3 617 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 KIAA1586Q9HCI6 787 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
SMIM12-203ENST00000426886 FSD2A1L4K1 749 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 CARNS1A5YM72 827 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 FSCN2O14926 492 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
SMIM12-203ENST00000426886 TMEM191BP0C7N4 346 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
SMIM12-203ENST00000426886 RPL9P32969 192 aaKnown RBP13.56□□□□□ -0.24
SMIM12-203ENST00000426886 MORC3Q14149 939 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 ANKRD40Q6AI12 368 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 ADSSL1Q8N142 457 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 CSGALNACT2Q8N6G5 542 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 FBXL18Q96ME1 805 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 CGNQ9P2M7 1197 aaKnown RBP13.56□□□□□ -0.24
SMIM12-203ENST00000426886 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 H3BQ06 376 aaPredicted RBP13.56□□□□□ -0.24
SMIM12-203ENST00000426886 ITGB3P05106 788 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 GLUD2P49448 558 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 CDR1P51861 262 aa13.56□□□□□ -0.24
SMIM12-203ENST00000426886 CYP24A1Q07973 514 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms