RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 ARHGEF38Q9NXL2 777 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 HIST1H2AGP0C0S8 130 aaPredicted RBP18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 HIST1H2ADP20671 130 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 NUP93Q8N1F7 819 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 HIST1H2AHQ96KK5 128 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 HIST1H2AJQ99878 128 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 H2AFJQ9BTM1 129 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 MTMR4Q9NYA4 1195 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 SNX12Q9UMY4 172 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 TRAF3IP3Q9Y228 551 aa18.87■□□□□ 0.61
ARHGEF28-203ENST00000426542 EEF2KO00418 725 aaKnown RBP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ALDH1A1P00352 501 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 MED15Q96RN5 788 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ARHGAP26Q9UNA1 814 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 AP3B1O00203 1094 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 EFCAB14O75071 495 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 FMO5P49326 533 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 TMEM62Q0P6H9 643 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 MICALL2Q8IY33 904 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 YIPF2Q9BWQ6 316 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 KCNQ2O43526 872 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 AKT1P31749 480 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 COG1Q8WTW3 980 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 RAB6BQ9NRW1 208 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 LSM7Q9UK45 103 aaKnown RBP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 FLT1P17948 1338 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 FAM205CA6NFA0 338 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ERFP50548 548 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ZNF543Q08ER8 600 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 TRADDQ15628 312 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 SNRNP35Q16560 246 aaKnown RBP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 SLC18A3Q16572 532 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 RBBP8NLQ8NC74 664 aaPredicted RBP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 PCDHB8Q9UN66 801 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 SUPT3HO75486 399 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ABCE1P61221 599 aaKnown RBP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 INPP5AQ14642 412 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 IL31Q6EBC2 164 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 PTPRN2Q92932 1015 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 CHP1Q99653 195 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 MUC3BQ9H195 1237 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 SMARCAD1Q9H4L7 1026 aa18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.86■□□□□ 0.61
ARHGEF28-203ENST00000426542 ARIH2O95376 493 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ST8SIA6P61647 398 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 DMC1Q14565 340 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 STILQ15468 1287 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 PCSK7Q16549 785 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ADCK2Q7Z695 626 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ARHGEF26Q96DR7 871 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ADNPQ9H2P0 1102 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 NPHS2Q9NP85 383 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ZC3H7BQ9UGR2 993 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 DAGLAQ9Y4D2 1042 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 GALCP54803 685 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 USP10Q14694 798 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 SGSM1Q2NKQ1 1148 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 TBC1D19Q8N5T2 526 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 TMA16Q96EY4 203 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 UVRAGQ9P2Y5 699 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 DYNC1LI2O43237 492 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 TBC1D16Q8TBP0 767 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 WDR35Q9P2L0 1181 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 SETD1BQ9UPS6 1966 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 C5orf58C9J3I9 102 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 RAP1GDS1P52306 607 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 VSNL1P62760 191 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 DPYDQ12882 1025 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 PABPC5Q96DU9 382 aaKnown RBP18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 EMC2Q15006 297 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 CYTH1Q15438 398 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 ATG9AQ7Z3C6 839 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 SYNDIG1Q9H7V2 258 aa18.85■□□□□ 0.61
ARHGEF28-203ENST00000426542 NDUFS3O75489 264 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 GRAP2O75791 330 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 TSPAN17Q96FV3 270 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 RBM15Q96T37 977 aaKnown RBP eCLIP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 SEPT5Q99719 369 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 DBR1Q9UK59 544 aaKnown RBP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 E2F8A0AVK6 867 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 ARHGEF9O43307 516 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 AGTP01019 485 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 CHN1P15882 459 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 RUBCNQ92622 972 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 FOPNLQ96NB1 174 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 PPP3CCP48454 512 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 CDC42EP1Q00587 391 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 EXOSC10Q01780 885 aaKnown RBP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 PIGHQ14442 188 aaPredicted RBP18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 CCSER1Q9C0I3 900 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 PCMTD2Q9NV79 361 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 UPP2O95045 317 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 OLFM3Q96PB7 478 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 ZCWPW1Q9H0M4 648 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 TASP1Q9H6P5 420 aa18.84■□□□□ 0.61
ARHGEF28-203ENST00000426542 SELENONQ9NZV5 590 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms