RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 ZBTB41Q5SVQ8 909 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 AXDND1Q5T1B0 1012 aaPredicted RBP27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 ANKS3Q6ZW76 656 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 TMEM105Q8N8V8 129 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 BACH2Q9BYV9 841 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 MFSD1Q9H3U5 465 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 IGSF9Q9P2J2 1179 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 TBX20Q9UMR3 447 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 NUB1Q9Y5A7 615 aa27.26■■□□□ 1.95
PTPMT1-203ENST00000426530 H0YCG3 227 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 FSHRP23945 695 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 LIG4P49917 911 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 ZNF131P52739 623 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 PTPN5P54829 565 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 VARS2Q5ST30 1063 aaKnown RBP27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 LARP4BQ92615 738 aaKnown RBP27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 PARVGQ9HBI0 331 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 HCFC1R1Q9NWW0 138 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 BACE2Q9Y5Z0 518 aa27.25■■□□□ 1.95
PTPMT1-203ENST00000426530 HNRNPDLO14979 420 aaKnown RBP27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 TBCAO75347 108 aaKnown RBP27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 CFHP08603 1231 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 HNRNPA1P09651 372 aaKnown RBP eCLIP27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 LAMP2P13473 410 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 ARPP19P56211 112 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 FLCNQ8NFG4 579 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 CLIC6Q96NY7 704 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 CCSER1Q9C0I3 900 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 FAM86C1Q9NVL1 165 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 FBXO2Q9UK22 296 aaPredicted RBP27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 FBXL21Q9UKT6 434 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 NOTCH4Q99466 2003 aa27.24■■□□□ 1.95
PTPMT1-203ENST00000426530 TRAK2O60296 914 aa27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 NMT1P30419 496 aaKnown RBP27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 MCM4P33991 863 aa27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 MRE11P49959 708 aa27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 ROR1Q01973 937 aa27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 CWF19L1Q69YN2 538 aaKnown RBP27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 KIF12Q96FN5 646 aa27.23■■□□□ 1.95
PTPMT1-203ENST00000426530 CLTAP09496 248 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 HOXA9P31269 272 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 RPL9P32969 192 aaKnown RBP27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 GUCY2FP51841 1108 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 SLC39A4Q6P5W5 647 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 SIX5Q8N196 739 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 SLC44A3Q8N4M1 653 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 FIZ1Q96SL8 496 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 PRRX2Q99811 253 aa27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.22■■□□□ 1.95
PTPMT1-203ENST00000426530 TTC26A0AVF1 554 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 WDR27A2RRH5 827 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 XYLBO75191 536 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 ZC2HC1CQ53FD0 456 aaPredicted RBP27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 ITFG1Q8TB96 612 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 MTMR6Q9Y217 621 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 NUMBLQ9Y6R0 609 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 MYH15Q9Y2K3 1946 aa27.21■■□□□ 1.95
PTPMT1-203ENST00000426530 LACTBL1A8MY62 500 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 TISP43B9A030 160 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 SYN3O14994 580 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 FAM189A1O60320 539 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 PIGRP01833 764 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 NPR3P17342 541 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 PPP2R3AQ06190 1150 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 HTR4Q13639 388 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 ENOX2Q16206 610 aaKnown RBP27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 ASTLQ6HA08 431 aaPredicted RBP27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 SLC8B1Q6J4K2 584 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 DYMQ7RTS9 669 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 KCNN1Q92952 543 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 SUSD3Q96L08 255 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 IKZF4Q9H2S9 585 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 DNMT3BQ9UBC3 853 aaKnown RBP27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 FBXL5Q9UKA1 691 aa27.2■■□□□ 1.94
PTPMT1-203ENST00000426530 ANK1P16157 1881 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 CACNA1HO95180 2353 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 H0Y858 1186 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 K7ELQ4 463 aaPredicted RBP27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 DDIT3P35638 169 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 CTXN3Q4LDR2 81 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 ING5Q8WYH8 240 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 FGF13Q92913 245 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 FAM212AQ96EL1 285 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 USP28Q96RU2 1077 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 RPP25Q9BUL9 199 aaKnown RBP27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 PLEKHA5Q9HAU0 1116 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 CDH7Q9ULB5 785 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 CA14Q9ULX7 337 aa27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 SRPRBQ9Y5M8 271 aaKnown RBP27.19■■□□□ 1.94
PTPMT1-203ENST00000426530 ANHXE9PGG2 379 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 OGTO15294 1046 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 TBC1D4O60343 1298 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 UVSSAQ2YD98 709 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 PARM1Q6UWI2 310 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 SFR1Q86XK3 245 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 MAP4K3Q8IVH8 894 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 DDX12PQ92771 950 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 FGF14Q92915 247 aa27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 INTS4Q96HW7 963 aaKnown RBP27.18■■□□□ 1.94
PTPMT1-203ENST00000426530 MSTO1Q9BUK6 570 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms