RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 BICDL2A1A5D9 508 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 PODXLO00592 558 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 KIF4AO95239 1232 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 LRPAP1P30533 357 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 TFAMQ00059 246 aaKnown RBP26.51■■□□□ 1.83
VEGFA-209ENST00000425836 UBE3AQ05086 875 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 CAMK1Q14012 370 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 CD300LGQ6UXG3 332 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 FAM84AQ96KN4 292 aa26.51■■□□□ 1.83
VEGFA-209ENST00000425836 PUF60Q9UHX1 559 aaKnown RBP26.51■■□□□ 1.83
VEGFA-209ENST00000425836 MAPK13O15264 365 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 TADA2AO75478 443 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 B3GAT3O94766 335 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 PSMC2P35998 433 aaKnown RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 NFKBIBQ15653 356 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 LMBRD2Q68DH5 695 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 DDX53Q86TM3 631 aaKnown RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 C3orf58Q8NDZ4 430 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 HASPINQ8TF76 798 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 MYLIPQ8WY64 445 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 FNBP1Q96RU3 617 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 POP1Q99575 1024 aaKnown RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 VN1R3Q9BXE9 311 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 DPP3Q9NY33 737 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 ADAM28Q9UKQ2 775 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 KIAA1671Q9BY89 1806 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 PTPRJQ12913 1337 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 TMEM189-UBE2V1I3L0A0 370 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 EFEMP2O95967 443 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 DLATP10515 647 aaKnown RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 SKOR2Q2VWA4 1001 aaPredicted RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 FAM186BQ8IYM0 893 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 CACTINQ8WUQ7 758 aaKnown RBP26.5■■□□□ 1.83
VEGFA-209ENST00000425836 MED15Q96RN5 788 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 LMAN2LQ9H0V9 348 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 INTS13Q9NVM9 706 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 RWDD2AQ9UIY3 292 aa26.5■■□□□ 1.83
VEGFA-209ENST00000425836 RALGAPA2Q2PPJ7 1873 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 SASS6Q6UVJ0 657 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 WDR49Q8IV35 697 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 OR5B17Q8NGF7 314 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 PARD3BQ8TEW8 1205 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 GAS2L1Q99501 681 aaPredicted RBP26.49■■□□□ 1.83
VEGFA-209ENST00000425836 MKNK1Q9BUB5 465 aa26.49■■□□□ 1.83
VEGFA-209ENST00000425836 MRPL38Q96DV4 380 aaKnown RBP26.48■■□□□ 1.83
VEGFA-209ENST00000425836 CGRRF1Q99675 332 aa26.48■■□□□ 1.83
VEGFA-209ENST00000425836 GPR62Q9BZJ7 368 aa26.48■■□□□ 1.83
VEGFA-209ENST00000425836 MTMR12Q9C0I1 747 aa26.48■■□□□ 1.83
VEGFA-209ENST00000425836 DACH1Q9UI36 760 aa26.48■■□□□ 1.83
VEGFA-209ENST00000425836 CITO14578 2027 aa26.48■■□□□ 1.83
VEGFA-209ENST00000425836 NLRC5Q86WI3 1866 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 ANO9A1A5B4 782 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TMEM191BP0C7N4 346 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TNNI1P19237 187 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 POU3F3P20264 500 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-209ENST00000425836 IGFBP4P22692 258 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 ERVFC1P60507 584 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 PTPROQ16827 1216 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 DUOXA2Q1HG44 320 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 C9orf57Q5W0N0 161 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 FUT10Q6P4F1 479 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TAS1R1Q7RTX1 841 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 RNF168Q8IYW5 571 aaPredicted RBP26.47■■□□□ 1.83
VEGFA-209ENST00000425836 VPS52Q8N1B4 723 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 C1orf127Q8N9H9 656 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TMC2Q8TDI7 906 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 BORCS6Q96GS4 357 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 CEP63Q96MT8 703 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TLR9Q9NR96 1032 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 LMCD1Q9NZU5 365 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 MTCH2Q9Y6C9 303 aa26.47■■□□□ 1.83
VEGFA-209ENST00000425836 TDRD15B5MCY1 1934 aaKnown RBP26.47■■□□□ 1.83
VEGFA-209ENST00000425836 LRRIQ3A6PVS8 624 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-209ENST00000425836 PIRO00625 290 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 PPEF2O14830 753 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 SLC16A3O15427 465 aaKnown RBP26.46■■□□□ 1.83
VEGFA-209ENST00000425836 CSPG5O95196 566 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 EPB41P11171 864 aaKnown RBP26.46■■□□□ 1.83
VEGFA-209ENST00000425836 IRS1P35568 1242 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 DLG4P78352 724 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 CLDN10P78369 228 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 SCARA3Q6AZY7 606 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 INTS8Q75QN2 995 aaKnown RBP26.46■■□□□ 1.83
VEGFA-209ENST00000425836 CSGALNACT2Q8N6G5 542 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 ZNF516Q92618 1163 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 ANKRD36BP1Q96IX9 119 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 ERCC5P28715 1186 aaPredicted RBP26.46■■□□□ 1.83
VEGFA-209ENST00000425836 VAMP7P51809 220 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 FILIP1Q7Z7B0 1213 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 CXorf38Q8TB03 319 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 STK39Q9UEW8 545 aa26.46■■□□□ 1.83
VEGFA-209ENST00000425836 SF3B1O75533 1304 aaKnown RBP eCLIP26.45■■□□□ 1.836e-7■■■■■ 31.1
VEGFA-209ENST00000425836 TRIP11Q15643 1979 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 FSCN2O14926 492 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 TNNC2P02585 160 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 SOD2P04179 222 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 KRT13P13646 458 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 BRCC3P46736 316 aa26.45■■□□□ 1.82
VEGFA-209ENST00000425836 MCCD1P59942 119 aaPredicted RBP26.45■■□□□ 1.82
VEGFA-209ENST00000425836 CT47A1Q5JQC4 288 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms