RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 KIAA1841Q6NSI8 718 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 NT5DC4Q86YG4 428 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 SLC9A9Q8IVB4 645 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 EFCAB13Q8IY85 973 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 TMEM130Q8N3G9 435 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 TRIML1Q8N9V2 468 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 CACTINQ8WUQ7 758 aaKnown RBP16.06■□□□□ 0.16
TMEM248-204ENST00000424964 PPP2R3CQ969Q6 453 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 TSG101Q99816 390 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 VN1R3Q9BXE9 311 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 GPR62Q9BZJ7 368 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
TMEM248-204ENST00000424964 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 PCDHGC5Q9Y5F6 944 aa16.06■□□□□ 0.16
TMEM248-204ENST00000424964 SF3B1O75533 1304 aaKnown RBP eCLIP16.05■□□□□ 0.16
TMEM248-204ENST00000424964 PSMA7O14818 248 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 FSCN2O14926 492 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 SOD2P04179 222 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 CTSAP10619 480 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 NR2F2P24468 414 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 IGFBP6P24592 240 aaPredicted RBP16.05■□□□□ 0.16
TMEM248-204ENST00000424964 RPL13P26373 211 aaKnown RBP16.05■□□□□ 0.16
TMEM248-204ENST00000424964 LRPAP1P30533 357 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 CYP24A1Q07973 514 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 MYBPC2Q14324 1141 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 SMC1AQ14683 1233 aaKnown RBP16.05■□□□□ 0.16
TMEM248-204ENST00000424964 TCEAL5Q5H9L2 206 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 KLHL10Q6JEL2 608 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 TAS1R1Q7RTX1 841 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 AUTS2Q8WXX7 1259 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 FNBP1Q96RU3 617 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 HERC2P3Q9BVR0 1158 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 ZBP1Q9H171 429 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 DPP3Q9NY33 737 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 ATG2AQ2TAZ0 1938 aa16.05■□□□□ 0.16
TMEM248-204ENST00000424964 TMEM189-UBE2V1I3L0A0 370 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 C2CD2LO14523 706 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 TRAPPC3O43617 180 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 URODP06132 367 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 BMP6P22004 513 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 CASP4P49662 377 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 ELAVL2Q12926 359 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 ADAM9Q13443 819 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 PSMD6Q15008 389 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 NFIL3Q16649 462 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 USP41Q3LFD5 358 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 LMBRD2Q68DH5 695 aaPredicted RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 ADGRD2Q7Z7M1 963 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 CEP57Q86XR8 500 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 C3orf58Q8NDZ4 430 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 DHTKD1Q96HY7 919 aaPredicted RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 ANKRD36BP1Q96IX9 119 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 IGFLR1Q9H665 355 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 TLE6Q9H808 572 aa16.04■□□□□ 0.16
TMEM248-204ENST00000424964 MRPL17Q9NRX2 175 aaKnown RBP16.04■□□□□ 0.16
TMEM248-204ENST00000424964 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.03■□□□□ 0.16
TMEM248-204ENST00000424964 HIDE1A8MVS5 230 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 PPP1R3GB7ZBB8 358 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 I3L4J1 428 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 CETN3O15182 167 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 TMEM191BP0C7N4 346 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 TNNI1P19237 187 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 CCNE1P24864 410 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 BRCC3P46736 316 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 GLUD2P49448 558 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 DUOXA2Q1HG44 320 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 ZCWPW2Q504Y3 356 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 C9orf57Q5W0N0 161 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 ANKRD40Q6AI12 368 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 CD300LGQ6UXG3 332 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 B3GALT6Q96L58 329 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 MFSD14AQ96MC6 490 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 INTS13Q9NVM9 706 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 SSX2IPQ9Y2D8 614 aa16.03■□□□□ 0.16
TMEM248-204ENST00000424964 TRIM49BA6NDI0 452 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 C2orf71A6NGG8 1288 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 PER2O15055 1255 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 EFEMP2O95967 443 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 TNNC2P02585 160 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 NRIP1P48552 1158 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.16
TMEM248-204ENST00000424964 LRRC63Q05C16 580 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 PTPN14Q15678 1187 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 EP400NLQ6ZTU2 488 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 WDR49Q8IV35 697 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.16
TMEM248-204ENST00000424964 CSGALNACT2Q8N6G5 542 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 NELFBQ8WX92 580 aa16.02■□□□□ 0.16
TMEM248-204ENST00000424964 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms