RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 TAS2R1Q9NYW7 299 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 PCYOX1Q9UHG3 505 aa11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 R3HDM2Q9Y2K5 976 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-202ENST00000424880 EXOC1LA0A1B0GW35 172 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L5A8MUK1 530 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 DCTN3O75935 186 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 HNRNPCP07910 306 aaKnown RBP eCLIP11.98□□□□□ -0.494e-8■□□□□ 8.5
SEC61A1-202ENST00000424880 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 HARSP12081 509 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ADRA1DP25100 572 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 GNA11P29992 359 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 PRKCIP41743 596 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 KDSRQ06136 332 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 SPATA24Q86W54 205 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC13A5Q86YT5 568 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ARHGAP18Q8N392 663 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 KAT5Q92993 513 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 RUSC1Q9BVN2 902 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ROPN1BQ9BZX4 212 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ROPN1Q9HAT0 212 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ANAPC5Q9UJX4 755 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 RPL26L1Q9UNX3 145 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 COL1A1P02452 1464 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 CTNNA2P26232 953 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ACVR2BQ13705 512 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF365Q70YC5 407 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 MAPKAPK5Q8IW41 473 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 EFCAB3Q8N7B9 438 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 CRNKL1Q9BZJ0 848 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 TRABDQ9H4I3 376 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 PARP2Q9UGN5 583 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 DDX25Q9UHL0 483 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 MYO3BQ8WXR4 1341 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 SYNGAP1Q96PV0 1343 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 H3BRJ5 948 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ZBTB39O15060 712 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 EDF1O60869 148 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 MED24O75448 989 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 SORBS2O94875 1100 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 NR3C1P04150 777 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 SLC16A2P36021 539 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 GALK1P51570 392 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 LPCAT4Q643R3 524 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 RAPH1Q70E73 1250 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 TRMT10CQ7L0Y3 403 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 DDX27Q96GQ7 796 aaKnown RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 BTBD10Q9BSF8 475 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 ASCC2Q9H1I8 757 aaPredicted RBP11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 VCX3BQ9H321 246 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 VCX3AQ9NNX9 186 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 KANSL3Q9P2N6 904 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 HSFX1Q9UBD0 423 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
SEC61A1-202ENST00000424880 COL5A3P25940 1745 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 A0A0A6YYK5 440 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 FGRP09769 529 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 ZSCAN5DPP0CG00 497 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 SPARCL1Q14515 664 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 EPC2Q52LR7 807 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 DUS1LQ6P1R4 473 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 ERLEC1Q96DZ1 483 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 FNBP1Q96RU3 617 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 REEP2Q9BRK0 252 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 PPM1HQ9ULR3 514 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF711Q9Y462 761 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 MAFGO15525 162 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 CDH16O75309 829 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 ZNF189O75820 626 aaPredicted RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 KRT4P19013 534 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 ATP5DP30049 168 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 NOP14P78316 857 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 OCRLQ01968 901 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 EFTUD2Q15029 972 aaKnown RBP eCLIP11.97□□□□□ -0.493e-7■■■■□ 20.5
SEC61A1-202ENST00000424880 KNOP1Q1ED39 458 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 LRRC47Q8N1G4 583 aaKnown RBP11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 GLIS1Q8NBF1 620 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 CEP70Q8NHQ1 597 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 PYDC1Q8WXC3 89 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 CCDC28BQ9BUN5 200 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 KIAA1586Q9HCI6 787 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 KLHL11Q9NVR0 708 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 KAT6AQ92794 2004 aa11.97□□□□□ -0.49
SEC61A1-202ENST00000424880 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 PALM3A6NDB9 673 aaPredicted RBP11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ATP5HO75947 161 aa11.96□□□□□ -0.49
SEC61A1-202ENST00000424880 ENO1P06733 434 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms