RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 OTUD7AQ8TE49 926 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 ACDQ96AP0 544 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 CAMK1GQ96NX5 476 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 SH2D3AQ9BRG2 576 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 ANO3Q9BYT9 981 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 THG1LQ9NWX6 298 aaKnown RBP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 SNTG2Q9NY99 539 aa7.05□□□□□ -1.28
SDCBP-203ENST00000424270 EVLQ9UI08 416 aaPredicted RBP7.05□□□□□ -1.28
SDCBP-203ENST00000424270 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 TRABD2BA6NFA1 517 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 UPK3BL1B0FP48 263 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 UPK3BL2E5RIL1 263 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 MEIS1O00470 390 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SH3BP5O60239 455 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 KIF4AO95239 1232 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 EFEMP2O95967 443 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 FOSP01100 380 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 PRKCBP05771 671 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 BCKDHBP21953 392 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 ITPKBP27987 946 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 DPP6P42658 865 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 NAPAP54920 295 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 AMPD2Q01433 879 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 TNK2Q07912 1038 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 DMC1Q14565 340 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SEC23AQ15436 765 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 C2orf27AQ580R0 203 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 WDR44Q5JSH3 913 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 PRSS36Q5K4E3 855 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 LYSMD4Q5XG99 296 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 NOTUMQ6P988 496 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 NFXL1Q6ZNB6 911 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 GPR155Q7Z3F1 870 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SYT12Q8IV01 421 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 HS6ST3Q8IZP7 471 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 CMTR1Q8N1G2 835 aaKnown RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 MINDY1Q8N5J2 469 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 EFCAB3Q8N7B9 438 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SMG8Q8ND04 991 aaKnown RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SETD7Q8WTS6 366 aaKnown RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 PNMA5Q96PV4 448 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 JPH2Q9BR39 696 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 LZTS2Q9BRK4 669 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SPZ1Q9BXG8 430 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 EIF2AQ9BY44 585 aaKnown RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 GPR88Q9GZN0 384 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 POLMQ9NP87 494 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 AVENQ9NQS1 362 aaPredicted RBP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 MIOSQ9NXC5 875 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 BCCIPQ9P287 314 aaKnown RBP eCLIP7.04□□□□□ -1.28
SDCBP-203ENST00000424270 SRPK3Q9UPE1 567 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 GIT1Q9Y2X7 761 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 BOLA1Q9Y3E2 137 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 COL4A3BPQ9Y5P4 624 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 ZMYM2Q9UBW7 1377 aa7.04□□□□□ -1.28
SDCBP-203ENST00000424270 MTCL1Q9Y4B5 1905 aaKnown RBP7.03□□□□□ -1.28
SDCBP-203ENST00000424270 TEX51A0A1B0GUA7 166 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 ARNTLO00327 626 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 MICAL2O94851 1124 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 EGFP01133 1207 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 SYPP08247 313 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 CCR2P41597 374 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 GNAQP50148 359 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 ADCY7P51828 1080 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 CXADRP78310 365 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 SETQ01105 290 aaPredicted RBP7.03□□□□□ -1.28
SDCBP-203ENST00000424270 TUSC3Q13454 348 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 UBXN11Q5T124 520 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 CYB5R4Q7L1T6 521 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 SRGAP1Q7Z6B7 1085 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 NAXDQ8IW45 347 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 PGBD3Q8N328 593 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 KRI1Q8N9T8 703 aaKnown RBP7.03□□□□□ -1.28
SDCBP-203ENST00000424270 LEMD2Q8NC56 503 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 TTC16Q8NEE8 873 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 OR2I1PQ8NGU4 316 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 CEP76Q8TAP6 659 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 SLC7A3Q8WY07 619 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 CPB2Q96IY4 423 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 PAAF1Q9BRP4 392 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 NXF3Q9H4D5 531 aaKnown RBP7.03□□□□□ -1.28
SDCBP-203ENST00000424270 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 DIAPH3Q9NSV4 1193 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 NXF1Q9UBU9 619 aaKnown RBP7.03□□□□□ -1.28
SDCBP-203ENST00000424270 SLC6A14Q9UN76 642 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 PAXBP1Q9Y5B6 917 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 INSL5Q9Y5Q6 135 aa7.03□□□□□ -1.28
SDCBP-203ENST00000424270 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 FAM149AA5PLN7 773 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TMEM150BA6NC51 233 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 FAM86B1E9PN63 330 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 INO80B-WBP1J3KQ70 363 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TNFRSF10BO14763 440 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 TRAPPC3O43617 180 aa7.02□□□□□ -1.29
SDCBP-203ENST00000424270 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms