RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 ZNF516Q92618 1163 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 DDX27Q96GQ7 796 aaKnown RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 KIAA1671Q9BY89 1806 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 CWH43Q9H720 699 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 AAASQ9NRG9 546 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 TUBGCP4Q9UGJ1 667 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 MSRAQ9UJ68 235 aa12.75□□□□□ -0.37
CAST-208ENST00000421689 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.75□□□□□ -0.37
CAST-208ENST00000421689 MRPL42Q9Y6G3 142 aaKnown RBP12.75□□□□□ -0.37
CAST-208ENST00000421689 NLRC5Q86WI3 1866 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 PTPRJQ12913 1337 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 LCHNA4D1U4 455 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 ZC3H11AO75152 810 aaKnown RBP eCLIP12.74□□□□□ -0.37
CAST-208ENST00000421689 C4BPAP04003 597 aaKnown RBP12.74□□□□□ -0.37
CAST-208ENST00000421689 ZNF18P17022 549 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 LAG3P18627 525 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 LRPAP1P30533 357 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
CAST-208ENST00000421689 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
CAST-208ENST00000421689 MAN2A1Q16706 1144 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
CAST-208ENST00000421689 TUBGCP2Q9BSJ2 902 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 PBX4Q9BYU1 374 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 MTMR12Q9C0I1 747 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 HSD3B7Q9H2F3 369 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 GOLGA2P5Q9HBQ8 144 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 ITGA11Q9UKX5 1188 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 FAN1Q9Y2M0 1017 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
CAST-208ENST00000421689 RWDD3Q9Y3V2 267 aa12.74□□□□□ -0.37
CAST-208ENST00000421689 NRP1O14786 923 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 B4GALT3O60512 393 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
CAST-208ENST00000421689 PHACTR2O75167 634 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 AFPP02771 609 aaKnown RBP12.73□□□□□ -0.37
CAST-208ENST00000421689 ITGB3P05106 788 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 CA3P07451 260 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 GALTP07902 379 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 TPM2P07951 284 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
CAST-208ENST00000421689 MYOGP15173 224 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 PBX2P40425 430 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 OR1G1P47890 313 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 GCLMP48507 274 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 CLCNKBP51801 687 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 BCAR1P56945 870 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 RBP5P82980 135 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 PPP3CAQ08209 521 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 KCNH2Q12809 1159 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 BIRC3Q13489 604 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 KRT31Q15323 416 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 UPP1Q16831 310 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 LRIT3Q3SXY7 679 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 ZACNQ401N2 412 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 C9orf57Q5W0N0 161 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 KRT39Q6A163 491 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 KCNT2Q6UVM3 1135 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 C15orf39Q6ZRI6 1047 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 C1orf127Q8N9H9 656 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 RNF214Q8ND24 703 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 MMRN2Q9H8L6 949 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 LIMA1Q9UHB6 759 aaKnown RBP12.73□□□□□ -0.37
CAST-208ENST00000421689 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
CAST-208ENST00000421689 PCDHB12Q9Y5F1 795 aa12.73□□□□□ -0.37
CAST-208ENST00000421689 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 LINC01553A4QN01 128 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 LRRC10BA6NIK2 292 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 PODXLO00592 558 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 PIRO00625 290 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 KRT19P08727 400 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 ATP1A3P13637 1013 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 POLR2BP30876 1174 aaKnown RBP12.72□□□□□ -0.37
CAST-208ENST00000421689 SLC11A1P49279 550 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 FMO5P49326 533 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 MXI1P50539 228 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 GUCY2FP51841 1108 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 TRPC3Q13507 836 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 VWA3BQ502W6 1294 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
CAST-208ENST00000421689 COLGALT1Q8NBJ5 622 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 FAM84AQ96KN4 292 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 SAMD11Q96NU1 681 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 PAAF1Q9BRP4 392 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 NKX2-4Q9H2Z4 354 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 AGAP1Q9UPQ3 857 aa12.72□□□□□ -0.37
CAST-208ENST00000421689 TMEM189-UBE2V1I3L0A0 370 aa12.71□□□□□ -0.37
CAST-208ENST00000421689 PMM2O15305 246 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms