RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 NOP14P78316 857 aaKnown RBP22.54■■□□□ 1.2
GPC1-202ENST00000420138 CUL2Q13617 745 aa22.54■■□□□ 1.2
GPC1-202ENST00000420138 ELF2Q15723 593 aa22.54■■□□□ 1.2
GPC1-202ENST00000420138 NBPF20Q3BBV1 942 aa22.54■■□□□ 1.2
GPC1-202ENST00000420138 TAS2R14Q9NYV8 317 aa22.54■■□□□ 1.2
GPC1-202ENST00000420138 GTF2IRD1Q9UHL9 959 aa22.54■■□□□ 1.2
GPC1-202ENST00000420138 TRIP12Q14669 1992 aaPredicted RBP22.53■■□□□ 1.2
GPC1-202ENST00000420138 ENC1O14682 589 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 PHACTR2O75167 634 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 ATP1A1P05023 1023 aaKnown RBP22.53■■□□□ 1.2
GPC1-202ENST00000420138 CYP11B1P15538 503 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 TNFAIP3P21580 790 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 TFAMQ00059 246 aaKnown RBP22.53■■□□□ 1.2
GPC1-202ENST00000420138 SNX17Q15036 470 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 TRIM58Q8NG06 486 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 DDX1Q92499 740 aaKnown RBP22.53■■□□□ 1.2
GPC1-202ENST00000420138 PCDHB18PQ96TA0 734 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 CARD6Q9BX69 1037 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 WBP1LQ9NX94 342 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 INTUQ9ULD6 942 aa22.53■■□□□ 1.2
GPC1-202ENST00000420138 BUB1O43683 1085 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 INHAP05111 366 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 NFICP08651 508 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 GRK4P32298 578 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 MYL6P60660 151 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 PCBP1Q15365 356 aaKnown RBP eCLIP22.52■■□□□ 1.2
GPC1-202ENST00000420138 KYAT1Q16773 422 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 PAPD7Q5XG87 772 aaKnown RBP22.52■■□□□ 1.2
GPC1-202ENST00000420138 CATSPER4Q7RTX7 472 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 RPUSD2Q8IZ73 545 aaKnown RBP22.52■■□□□ 1.2
GPC1-202ENST00000420138 NME8Q8N427 588 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 CXorf38Q8TB03 319 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 XYLT2Q9H1B5 865 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 PTCH2Q9Y6C5 1203 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 TACC1O75410 805 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 MYCNP04198 464 aaPredicted RBP22.52■■□□□ 1.2
GPC1-202ENST00000420138 H2AFZP0C0S5 128 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 TUBB2AQ13885 445 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 ERCC6LQ2NKX8 1250 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 H2AFVQ71UI9 128 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 TMEM130Q8N3G9 435 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 UBR7Q8N806 425 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 NOX5Q96PH1 765 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 TUBB2BQ9BVA1 445 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 ASB7Q9H672 318 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 DDX20Q9UHI6 824 aaKnown RBP22.52■■□□□ 1.2
GPC1-202ENST00000420138 CDC23Q9UJX2 597 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 CNTN6Q9UQ52 1028 aa22.52■■□□□ 1.2
GPC1-202ENST00000420138 CEP350Q5VT06 3117 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 SCN10AQ9Y5Y9 1956 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 EFCAB8A8MWE9 144 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 TFRCP02786 760 aaKnown RBP22.51■■□□□ 1.19
GPC1-202ENST00000420138 TMEM191BP0C7N4 346 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 CST5P28325 142 aaPredicted RBP22.51■■□□□ 1.19
GPC1-202ENST00000420138 GRM5P41594 1212 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 GALCP54803 685 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 FMO1Q01740 532 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 KCNA10Q16322 511 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 JADE1Q6IE81 842 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 GDF6Q6KF10 455 aaPredicted RBP22.51■■□□□ 1.19
GPC1-202ENST00000420138 SIX4Q9UIU6 781 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 MROH7Q68CQ1 1323 aa22.51■■□□□ 1.19
GPC1-202ENST00000420138 ANO9A1A5B4 782 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 TADA3O75528 432 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 ASGR1P07306 291 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 MMEP08473 750 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 CRYBB1P53674 252 aaPredicted RBP22.5■■□□□ 1.19
GPC1-202ENST00000420138 TAF2Q6P1X5 1199 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 C1orf127Q8N9H9 656 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 UBXN4Q92575 508 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 WNT8BQ93098 351 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 ANKRD36BP1Q96IX9 119 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 ADPGKQ9BRR6 497 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 EIF2AQ9BY44 585 aaKnown RBP22.5■■□□□ 1.19
GPC1-202ENST00000420138 PCDHGC5Q9Y5F6 944 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 GRIN2DO15399 1336 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 TMCO5BA8MYB1 307 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 NPTXRO95502 500 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 CALCAP01258 141 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 TNNC2P02585 160 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 CDR2Q01850 454 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 DCAF4L1Q3SXM0 396 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 TAF3Q5VWG9 929 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 SLC27A1Q6PCB7 646 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 ISCUQ9H1K1 167 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 HMX1Q9NP08 348 aaPredicted RBP22.5■■□□□ 1.19
GPC1-202ENST00000420138 JRKLQ9Y4A0 524 aa22.5■■□□□ 1.19
GPC1-202ENST00000420138 KRT5P13647 590 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 TBXAS1P24557 533 aaPredicted RBP22.49■■□□□ 1.19
GPC1-202ENST00000420138 SGSM1Q2NKQ1 1148 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 NOTUMQ6P988 496 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 ACAP3Q96P50 834 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 CXCL16Q9H2A7 254 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 ANK1P16157 1881 aa22.49■■□□□ 1.19
GPC1-202ENST00000420138 A0A0A6YYK5 440 aaPredicted RBP22.48■■□□□ 1.19
GPC1-202ENST00000420138 TMEM253P0C7T8 217 aa22.48■■□□□ 1.19
GPC1-202ENST00000420138 PDE6CP51160 858 aa22.48■■□□□ 1.19
GPC1-202ENST00000420138 SESTD1Q86VW0 696 aa22.48■■□□□ 1.19
GPC1-202ENST00000420138 CCDC94Q9BW85 323 aaPredicted RBP22.48■■□□□ 1.19
GPC1-202ENST00000420138 IMPG2Q9BZV3 1241 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms