RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PHF2O75151 1096 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ACSL3O95573 720 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 KRT13P13646 458 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 MUTP22033 750 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ADD2P35612 726 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PTGIRP43119 386 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CCR3P51677 355 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 NPEPPSP55786 919 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 WDR4P57081 412 aaKnown RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 AP2B1P63010 937 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SCARF1Q14162 830 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 LPIN1Q14693 890 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PPP2R5BQ15173 497 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CLUL1Q15846 466 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 INAQ16352 499 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 KYNUQ16719 465 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CCDC153Q494R4 210 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 LRRC24Q50LG9 513 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 AKAP4Q5JQC9 854 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 MPRIPQ6WCQ1 1025 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 DTHD1Q6ZMT9 781 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 COPS6Q7L5N1 327 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 EPM2AIP1Q7L775 607 aaPredicted RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 RASSF3Q86WH2 238 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CCDC25Q86WR0 208 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PDSS2Q86YH6 399 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SRRM1Q8IYB3 904 aaKnown RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 FAM186BQ8IYM0 893 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ARHGAP24Q8N264 748 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SRBD1Q8N5C6 995 aaKnown RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 C4orf32Q8N8J7 132 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 OR6Y1Q8NGX8 325 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PRPF31Q8WWY3 499 aaKnown RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CASP10Q92851 521 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ART4Q93070 314 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 C18orf8Q96DM3 657 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 VPS50Q96JG6 964 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 CDK15Q96Q40 435 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SPZ1Q9BXG8 430 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 NAPBQ9H115 298 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 UBAP1Q9NZ09 502 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 NAGPAQ9UK23 515 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 STX8Q9UNK0 236 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 FAF1Q9UNN5 650 aaPredicted RBP6.77□□□□□ -1.32
CCNT1-202ENST00000417344 DMTF1Q9Y222 760 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 TRAF3IP3Q9Y228 551 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SUGT1Q9Y2Z0 365 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 ACTL7BQ9Y614 415 aa6.77□□□□□ -1.32
CCNT1-202ENST00000417344 PXDNQ92626 1479 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 SH3PXD2BA1X283 911 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CCDC162PA2VCL2 907 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CFAP69A5D8W1 941 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 DDX3YO15523 660 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 STK10O94804 968 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 HAUS5O94927 633 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 SMIM18P0DKX4 95 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 UQCRBP14927 111 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CHRNA3P32297 505 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 EPS15P42566 896 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 RAP1GDS1P52306 607 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CHN2P52757 468 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CASP7P55210 303 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ARPC4P59998 168 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 NAA20P61599 178 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 LRRC63Q05C16 580 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 PPIDQ08752 370 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 TNIP1Q15025 636 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 TMEM266Q2M3C6 531 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 DCAF12L1Q5VU92 463 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 NEPROQ6NW34 567 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ALKBH5Q6P6C2 394 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 MFSD6Q6ZSS7 791 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF571Q7Z3V5 609 aaPredicted RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 DNAAF5Q86Y56 855 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 DZIP1Q86YF9 867 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ANKRD35Q8N283 1001 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 TTLL11Q8NHH1 800 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 PLEKHO2Q8TD55 490 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 LRRC15Q8TF66 581 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 C7orf43Q8WVR3 580 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ATP6V0A1Q93050 837 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 NSL1Q96IY1 281 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CDK5RAP3Q96JB5 506 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CGREF1Q99674 301 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 C7orf25Q9BPX7 421 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CCSER1Q9C0I3 900 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ANKRD2Q9GZV1 360 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 RBM38Q9H0Z9 239 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 TUT1Q9H6E5 874 aaKnown RBP6.77□□□□□ -1.33
CCNT1-202ENST00000417344 NRDE2Q9H7Z3 1164 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 UBN1Q9NPG3 1134 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 CYLDQ9NQC7 956 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ARL8BQ9NVJ2 186 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 SYNPO2Q9UMS6 1093 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 PCDHA3Q9Y5H8 950 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 TACC3Q9Y6A5 838 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ATP8B3O60423 1300 aa6.77□□□□□ -1.33
CCNT1-202ENST00000417344 ATRNO75882 1429 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms