RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 BRCC3P46736 316 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 ATXN1P54253 815 aaKnown RBP16.92■□□□□ 0.3
DDX56-202ENST00000415758 MRPL58Q14197 206 aaKnown RBP16.92■□□□□ 0.3
DDX56-202ENST00000415758 ERMNQ8TAM6 284 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 KIFAP3Q92845 792 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 IFT74Q96LB3 600 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 IER2Q9BTL4 223 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 ZFP14Q9HCL3 533 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 TNFSF13BQ9Y275 285 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 CACNA1BQ00975 2339 aa16.92■□□□□ 0.3
DDX56-202ENST00000415758 EPG5Q9HCE0 2579 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 I3L4J1 428 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 K7ERI5 159 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 MAN2B1O00754 1011 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 ZNF197O14709 1029 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 SYN3O14994 580 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 LRG1P02750 347 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 TDGF1P13385 188 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 CEBPBP17676 345 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 ELF1P32519 619 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 GRM5P41594 1212 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 LMNB2Q03252 620 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 SOX4Q06945 474 aaPredicted RBP16.91■□□□□ 0.3
DDX56-202ENST00000415758 MTAPQ13126 283 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 ORC2Q13416 577 aaPredicted RBP16.91■□□□□ 0.3
DDX56-202ENST00000415758 TRIM29Q14134 588 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 TSSK4Q6SA08 328 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 MAP4K3Q8IVH8 894 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 CHRDQ9H2X0 955 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 GOLGA2P5Q9HBQ8 144 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 TOPORSQ9NS56 1045 aaPredicted RBP16.91■□□□□ 0.3
DDX56-202ENST00000415758 SPTBN2O15020 2390 aa16.91■□□□□ 0.3
DDX56-202ENST00000415758 LARGE1O95461 756 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 NRLP54845 237 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 FAM78AQ5JUQ0 283 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 TPGS2Q68CL5 300 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 IRF7Q92985 503 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 ASB16Q96NS5 453 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 CORO1BQ9BR76 489 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 TRMT61BQ9BVS5 477 aaKnown RBP16.9■□□□□ 0.3
DDX56-202ENST00000415758 CCDC94Q9BW85 323 aaPredicted RBP16.9■□□□□ 0.3
DDX56-202ENST00000415758 SLC38A7Q9NVC3 462 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 MAFFQ9ULX9 164 aa16.9■□□□□ 0.3
DDX56-202ENST00000415758 H7C4K7 107 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 PRRG1O14668 218 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 SEC24AO95486 1093 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 KCNE1P15382 129 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
DDX56-202ENST00000415758 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 ACO2Q99798 780 aaKnown RBP16.89■□□□□ 0.29
DDX56-202ENST00000415758 RTKNQ9BST9 563 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 CDT1Q9H211 546 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 BRD9Q9H8M2 597 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 CYP4F11Q9HBI6 524 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 POLD4Q9HCU8 107 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 ZNF334Q9HCZ1 680 aaPredicted RBP16.89■□□□□ 0.29
DDX56-202ENST00000415758 INSL5Q9Y5Q6 135 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 COL4A2P08572 1712 aa16.89■□□□□ 0.29
DDX56-202ENST00000415758 ACACBO00763 2458 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 KMT2BQ9UMN6 2715 aaPredicted RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 PODXLO00592 558 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 NRG2O14511 850 aaPredicted RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 JAK2O60674 1132 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 OR52Z1P0C646 297 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 PSMC3P17980 439 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 CCR2P41597 374 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 GRM2Q14416 872 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 ECM1Q16610 540 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 CYP4A22Q5TCH4 519 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 PDZD4Q76G19 769 aaPredicted RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 CELF5Q8N6W0 485 aaKnown RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 CEP120Q8N960 986 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 SMARCD2Q92925 531 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 CNTNAP3BQ96NU0 1288 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 CNTNAP3Q9BZ76 1288 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 BHMT2Q9H2M3 363 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 TMEM134Q9H6X4 195 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 TRPV4Q9HBA0 871 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 FBXL5Q9UKA1 691 aa16.88■□□□□ 0.29
DDX56-202ENST00000415758 CDV3Q9UKY7 258 aaKnown RBP16.88■□□□□ 0.29
DDX56-202ENST00000415758 CITO14578 2027 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 MOSPD3O75425 235 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 PROZP22891 400 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 FXR2P51116 673 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX56-202ENST00000415758 EPHA5P54756 1037 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 PPP2R5DQ14738 602 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
DDX56-202ENST00000415758 ZNF174Q15697 407 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 VITQ6UXI7 678 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 LEMD2Q8NC56 503 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 DEPDC1BQ8WUY9 529 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 FAM3CQ92520 227 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
DDX56-202ENST00000415758 ZSWIM3Q96MP5 696 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms