RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAM102AQ5T9C2 384 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 AGAP9Q5VTM2 703 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 RNF207Q6ZRF8 634 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 OVCH2Q7RTZ1 564 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 RHOT2Q8IXI1 618 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 IL17DQ8TAD2 202 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 KLHDC4Q8TBB5 520 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 TMEM60Q9H2L4 133 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 GNL3LQ9NVN8 582 aaKnown RBP4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 JKAMPQ9P055 326 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 CEP72Q9P209 647 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 CHST2Q9Y4C5 530 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 PCDHA3Q9Y5H8 950 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 NR2E3Q9Y5X4 410 aa4.89□□□□□ -1.63
HMGB1P11-201ENST00000413899 A0A088AWK7 358 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 VSTM5A8MXK1 200 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 LEFTY2O00292 366 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRRG2O14669 202 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 KIF3BO15066 747 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 KIAA0391O15091 583 aaKnown RBP4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PEX11BO96011 259 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 HRGP04196 525 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 ADRB1P08588 477 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 SBK3P0C264 359 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 GCSHP23434 173 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRDX5P30044 214 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC6A4P31645 630 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 APOBEC3AP31941 199 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 NHLH2Q02577 135 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 ARHGAP29Q52LW3 1261 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 HSP90AB2PQ58FF8 381 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 RABL3Q5HYI8 236 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZNF365Q70YC5 407 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 UBE3BQ7Z3V4 1068 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PALM2Q8IXS6 379 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 CAMKK1Q8N5S9 505 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 FITM2Q8N6M3 262 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PPP1R35Q8TAP8 253 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 EXTL1Q92935 676 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PGBD4Q96DM1 585 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 LRFN3Q9BTN0 628 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PACSIN1Q9BY11 444 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRDM11Q9NQV5 511 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 PNPOQ9NVS9 261 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 RLIMQ9NVW2 624 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 OBP2AQ9NY56 170 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 ABCF2Q9UG63 623 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 NCANO14594 1321 aa4.88□□□□□ -1.63
HMGB1P11-201ENST00000413899 AHRRA9YTQ3 701 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 FAM227AF5H4B4 570 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 RECQL4O94761 1208 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 ANXA1P04083 346 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC6A2P23975 617 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 KRTAP10-2P60368 255 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 PLS1Q14651 629 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 USP39Q53GS9 565 aaKnown RBP4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 CCDC181Q5TID7 509 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 MED25Q71SY5 747 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 DGKHQ86XP1 1220 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 KIAA0319LQ8IZA0 1049 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 PLBD2Q8NHP8 589 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 NUP133Q8WUM0 1156 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 MTFMTQ96DP5 389 aaKnown RBP4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 NEU1Q99519 415 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC46A2Q9BY10 475 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 MRPL46Q9H2W6 279 aaKnown RBP4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 GSTO2Q9H4Y5 243 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 PARPBPQ9NWS1 579 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 FEZ2Q9UHY8 353 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 ZDHHC8Q9ULC8 765 aa4.87□□□□□ -1.63
HMGB1P11-201ENST00000413899 GAGE12BA1L429 117 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 CDHR4A6H8M9 788 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 GAGE12HA6NDE8 117 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 PRSS29PA6NIE9 313 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 ITGB1P05556 798 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 CKBP12277 381 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 PIK3CGP48736 1102 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 RAB1AP62820 205 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 GPSM2P81274 684 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 HLTFQ14527 1009 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 GRM3Q14832 879 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 ANO6Q4KMQ2 910 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 CCDC93Q567U6 631 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 EMC10Q5UCC4 262 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 GDF7Q7Z4P5 450 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 SRGAP1Q7Z6B7 1085 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 DAAM2Q86T65 1068 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 C1orf210Q8IVY1 113 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 FAM43AQ8N2R8 423 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 SLC35A4Q96G79 324 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 PCGF6Q9BYE7 350 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 REXO4Q9GZR2 422 aaKnown RBP4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 FAM204AQ9H8W3 233 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 KLHL11Q9NVR0 708 aa4.86□□□□□ -1.63
HMGB1P11-201ENST00000413899 CFAP97Q9P2B7 532 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms