RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 DDX27Q96GQ7 796 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 B3GALT6Q96L58 329 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 DMAC2Q9NW81 257 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 RBAKQ9NYW8 714 aaPredicted RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 CGNQ9P2M7 1197 aaKnown RBP14.3□□□□□ -0.12
HDAC8-210ENST00000412342 SF3B1O75533 1304 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■■■■■ 97.8
HDAC8-210ENST00000412342 SCN1AP35498 2009 aa14.3□□□□□ -0.12
HDAC8-210ENST00000412342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 PDXKO00764 312 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 PPEF2O14830 753 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 PER2O15055 1255 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 TBX10O75333 385 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 TADA2AO75478 443 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 B3GAT3O94766 335 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 IL18RAPO95256 599 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 CXCL14O95715 111 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 BRCC3P46736 316 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 GLUD2P49448 558 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 RBM10P98175 930 aaKnown RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 ADAM15Q13444 863 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 TMEM132DQ14C87 1099 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 ZCWPW2Q504Y3 356 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 RTP2Q5QGT7 225 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 HS2ST1Q7LGA3 356 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 RBM23Q86U06 439 aaKnown RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 SLC9A9Q8IVB4 645 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 GPR65Q8IYL9 337 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 SMYD4Q8IYR2 804 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 FAM212AQ96EL1 285 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 UBE2ZQ9H832 354 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 RXFP1Q9HBX9 757 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 THEGQ9P2T0 379 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-210ENST00000412342 PTPRJQ12913 1337 aa14.29□□□□□ -0.12
HDAC8-210ENST00000412342 ANO9A1A5B4 782 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 CLASP2O75122 1294 aaKnown RBP14.28□□□□□ -0.12
HDAC8-210ENST00000412342 URODP06132 367 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 BMP6P22004 513 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 FGFR3P22607 806 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■■ 61.8
HDAC8-210ENST00000412342 DLX2Q07687 328 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-210ENST00000412342 USP41Q3LFD5 358 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 ZNF658Q5TYW1 1059 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-210ENST00000412342 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 XXYLT1Q8NBI6 393 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 CXorf38Q8TB03 319 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 GOLGA5Q8TBA6 731 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 HLA-CQ95604 372 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 SMARCE1Q969G3 411 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 PPP2R3CQ969Q6 453 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 FAM84AQ96KN4 292 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 CDCA3Q99618 268 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-210ENST00000412342 TLE6Q9H808 572 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 KIAA1586Q9HCI6 787 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 PDE11AQ9HCR9 933 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 RMND1Q9NWS8 449 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 MAN1B1Q9UKM7 699 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 COG5Q9UP83 839 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 MAPK8IP1Q9UQF2 711 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 TRAF3IP3Q9Y228 551 aa14.28□□□□□ -0.12
HDAC8-210ENST00000412342 ZNF233A6NK53 670 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 I3L4J1 428 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 PIRO00625 290 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 XPOTO43592 962 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 NCK2O43639 380 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 SMC2O95347 1197 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 CNPP09543 421 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 CYP2J2P51589 502 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 TFF2Q03403 129 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 ELAVL2Q12926 359 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 SNRNP35Q16560 246 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 NFIL3Q16649 462 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 FAM171A1Q5VUB5 890 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 C9orf57Q5W0N0 161 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 SCARA3Q6AZY7 606 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 LNX1Q8TBB1 728 aaPredicted RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 SLC22A17Q8WUG5 538 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 KLHL5Q96PQ7 755 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 IGFLR1Q9H665 355 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 MRPL17Q9NRX2 175 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 CLDND1Q9NY35 253 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 CLEC1BQ9P126 229 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 HOOK1Q9UJC3 728 aaKnown RBP14.27□□□□□ -0.13
HDAC8-210ENST00000412342 HCFC2Q9Y5Z7 792 aa14.27□□□□□ -0.13
HDAC8-210ENST00000412342 MTCL1Q9Y4B5 1905 aaKnown RBP14.26□□□□□ -0.13
HDAC8-210ENST00000412342 C2CD2LO14523 706 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 TEX28O15482 410 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 KIF20AO95235 890 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 NR3C1P04150 777 aa14.26□□□□□ -0.13
HDAC8-210ENST00000412342 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms