RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
AP001056.1-201ENST00000411956 GOLGA2P5Q9HBQ8 144 aa17.05■□□□□ 0.32
AP001056.1-201ENST00000411956 HCSTQ9UBK5 93 aa17.05■□□□□ 0.32
AP001056.1-201ENST00000411956 DDHD2O94830 711 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 FMO5P49326 533 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 MYL7Q01449 175 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 RNASELQ05823 741 aaKnown RBP17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 TUSC3Q13454 348 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 ZACNQ401N2 412 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 KRT39Q6A163 491 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 FAM109BQ6ICB4 259 aaPredicted RBP17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 CHRDL2Q6WN34 429 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 SV2AQ7L0J3 742 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 ZNF280BQ86YH2 543 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 ZBED2Q9BTP6 218 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 VPS16Q9H269 839 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 DPP3Q9NY33 737 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 CACNG4Q9UBN1 327 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
AP001056.1-201ENST00000411956 KIAA1671Q9BY89 1806 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 CASTOR2A6NHX0 329 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 LRRC10BA6NIK2 292 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 TLL1O43897 1013 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 N4BP1O75113 896 aaKnown RBP17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 ITGB3P05106 788 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 TPM2P07951 284 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 LRPAP1P30533 357 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 FANCCQ00597 558 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 BIRC3Q13489 604 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 COLGALT2Q8IYK4 626 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 CXorf38Q8TB03 319 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 SP7Q8TDD2 431 aaPredicted RBP17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 FAM193BQ96PV7 902 aaPredicted RBP17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 RAD9AQ99638 391 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 CWH43Q9H720 699 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 NRDE2Q9H7Z3 1164 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 SIX4Q9UIU6 781 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 ITGA11Q9UKX5 1188 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 INSL6Q9Y581 213 aa17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 MRPL42Q9Y6G3 142 aaKnown RBP17.03■□□□□ 0.32
AP001056.1-201ENST00000411956 LGALS16A8MUM7 142 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 GRXCR1A8MXD5 290 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 PPEF2O14830 753 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 VNN1O95497 513 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 SERPINC1P01008 464 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 POLR2BP30876 1174 aaKnown RBP17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 RABGGTBP53611 331 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 SCARA3Q6AZY7 606 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 TAS1R2Q8TE23 839 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 UROC1Q96N76 676 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 PAAF1Q9BRP4 392 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 TMEM175Q9BSA9 504 aa17.02■□□□□ 0.32
AP001056.1-201ENST00000411956 GBF1Q92538 1859 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 ANO9A1A5B4 782 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 LCHNA4D1U4 455 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 PODXLO00592 558 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 PMM2O15305 246 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 P4HA2O15460 535 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 ZC3H11AO75152 810 aaKnown RBP eCLIP17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 PHACTR2O75167 634 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 KRT19P08727 400 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 PIK3CAP42336 1068 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 CLCNKBP51801 687 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 UVSSAQ2YD98 709 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 EPC2Q52LR7 807 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 C9orf57Q5W0N0 161 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 COQ4Q9Y3A0 265 aa17.01■□□□□ 0.31
AP001056.1-201ENST00000411956 GTPBP10A4D1E9 387 aaKnown RBP17■□□□□ 0.31
AP001056.1-201ENST00000411956 PIRO00625 290 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
AP001056.1-201ENST00000411956 LINC00271P0C7V0 271 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 RPL9P32969 192 aaKnown RBP17■□□□□ 0.31
AP001056.1-201ENST00000411956 SLC11A1P49279 550 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 RBP5P82980 135 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 NCOA4Q13772 614 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 UPP1Q16831 310 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 FIBCD1Q8N539 461 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 FBXL13Q8NEE6 735 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 SEMA4DQ92854 862 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 ZNF560Q96MR9 790 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 NAP1L5Q96NT1 182 aaPredicted RBP17■□□□□ 0.31
AP001056.1-201ENST00000411956 RTN4Q9NQC3 1192 aaKnown RBP17■□□□□ 0.31
AP001056.1-201ENST00000411956 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
AP001056.1-201ENST00000411956 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 NRP1O14786 923 aa16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 AP5Z1O43299 807 aa16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 KIF4AO95239 1232 aa16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 MYOGP15173 224 aa16.99■□□□□ 0.31
AP001056.1-201ENST00000411956 LAG3P18627 525 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms