RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ERAP1Q9NZ08 941 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 EHD2Q9NZN4 543 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 UTP11Q9Y3A2 253 aaKnown RBP14.54□□□□□ -0.08
LIMS1-205ENST00000410093 TELO2Q9Y4R8 837 aa14.54□□□□□ -0.08
LIMS1-205ENST00000410093 RBM47A0AV96 593 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 H3BQF6 201 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 PDHXO00330 501 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 RAD51CO43502 376 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 GLI1P08151 1106 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 MMEP08473 750 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 UNGP13051 313 aaPredicted RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 KRT5P13647 590 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 DRG2P55039 364 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 SLC7A5Q01650 507 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 LAMTOR4Q0VGL1 99 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 IRF5Q13568 498 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 PLCB4Q15147 1175 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 SEL1L2Q5TEA6 688 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 TDRD10Q5VZ19 366 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 TSHZ1Q6ZSZ6 1077 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF771Q7L3S4 317 aaPredicted RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF564Q8TBZ8 553 aaPredicted RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 CD99L2Q8TCZ2 262 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 KAT5Q92993 513 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 TATDN2Q93075 761 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ZNF653Q96CK0 615 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ACO2Q99798 780 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ZSWIM1Q9BR11 485 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 FAM124BQ9H5Z6 455 aaPredicted RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 MRPL47Q9HD33 250 aaKnown RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 TOPORSQ9NS56 1045 aaPredicted RBP14.53□□□□□ -0.08
LIMS1-205ENST00000410093 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ADAM21Q9UKJ8 722 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 MTUS1Q9ULD2 1270 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 COG5Q9UP83 839 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 PLXNB2O15031 1838 aa14.53□□□□□ -0.08
LIMS1-205ENST00000410093 ACKR2O00590 384 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 PHACTR2O75167 634 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 ZMYND10O75800 440 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 ERLIN2O94905 339 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 IL18RAPO95256 599 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 FGGP02679 453 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CLTAP09496 248 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 MYBL2P10244 700 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 TXNP10599 105 aaKnown RBP14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CHRNA3P32297 505 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CYP2C19P33261 490 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CTNNA1P35221 906 aaKnown RBP14.52□□□□□ -0.08
LIMS1-205ENST00000410093 ACOT2P49753 483 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 DNA2P51530 1060 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CENPCQ03188 943 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 MTMR3Q13615 1198 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 FAM187BQ17R55 369 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 DUOXA2Q1HG44 320 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 SGSM1Q2NKQ1 1148 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 LIN9Q5TKA1 542 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 CD302Q8IX05 232 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 NUP85Q9BW27 656 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 TXNRD2Q9NNW7 524 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 SMARCAL1Q9NZC9 954 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 ANKFY1Q9P2R3 1169 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.52□□□□□ -0.08
LIMS1-205ENST00000410093 PCDHA3Q9Y5H8 950 aa14.52□□□□□ -0.08
LIMS1-205ENST00000410093 PODXLO00592 558 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 CYP1A1P04798 512 aaPredicted RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PRKCBP05771 671 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PROZP22891 400 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 NSFP46459 744 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 TNFAIP2Q03169 654 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PTP4A2Q12974 167 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 NCOA4Q13772 614 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 Q3C1V9 767 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 MPZL3Q6UWV2 235 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 KLHL7Q8IXQ5 586 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 CD101Q93033 1021 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PARK7Q99497 189 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 SH3GL2Q99962 352 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 FZD8Q9H461 694 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PRMT7Q9NVM4 692 aaPredicted RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 VPS18Q9P253 973 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 MORF4L1Q9UBU8 362 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 CNOT8Q9UFF9 292 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 SCINQ9Y6U3 715 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 SORBS3O60504 671 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 B4GALT4O60513 344 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ARIH2O95376 493 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 LSM8O95777 96 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 SYF2O95926 243 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ASS1P00966 412 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 GH1P01241 217 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 PGK2P07205 417 aa14.51□□□□□ -0.09
LIMS1-205ENST00000410093 ACO1P21399 889 aaKnown RBP14.51□□□□□ -0.09
LIMS1-205ENST00000410093 MAN1A1P33908 653 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms