RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 RWDD3Q9Y3V2 267 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 PTPRJQ12913 1337 aa22.3■■□□□ 1.16
C4orf48-202ENST00000409860 LINC01553A4QN01 128 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 GTF2H1P32780 548 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 RPL9P32969 192 aaKnown RBP22.29■■□□□ 1.16
C4orf48-202ENST00000409860 OR1G1P47890 313 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 ALDH7A1P49419 539 aaKnown RBP22.29■■□□□ 1.16
C4orf48-202ENST00000409860 CDKAL1Q5VV42 579 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 TRIM59Q8IWR1 403 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 ANKRD20A12PQ8NF67 263 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 CLP1Q92989 425 aaKnown RBP22.29■■□□□ 1.16
C4orf48-202ENST00000409860 ZNF558Q96NG5 402 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 NKX2-4Q9H2Z4 354 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 GOLGA2P5Q9HBQ8 144 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 DNAJB4Q9UDY4 337 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 ITGA11Q9UKX5 1188 aa22.29■■□□□ 1.16
C4orf48-202ENST00000409860 R3HCC1Q9Y3T6 440 aaKnown RBP22.29■■□□□ 1.16
C4orf48-202ENST00000409860 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.29■■□□□ 1.16
C4orf48-202ENST00000409860 FNDC1Q4ZHG4 1894 aaPredicted RBP22.28■■□□□ 1.16
C4orf48-202ENST00000409860 GOLGA6L19H0YKK7 550 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 B4GALT3O60512 393 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 ALDH2P05091 517 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 DNAJB2P25686 324 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 LRPAP1P30533 357 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 SLC11A1P49279 550 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 GUCY2FP51841 1108 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 BCAR1P56945 870 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 BIRC3Q13489 604 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 C1orf220Q5T0J3 134 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 LUZP1Q86V48 1076 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 COLGALT1Q8NBJ5 622 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 SLC35C1Q96A29 364 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 FAM84AQ96KN4 292 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 MMRN2Q9H8L6 949 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 FAN1Q9Y2M0 1017 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 PRG3Q9Y2Y8 225 aaPredicted RBP22.28■■□□□ 1.16
C4orf48-202ENST00000409860 PCDHB12Q9Y5F1 795 aa22.28■■□□□ 1.16
C4orf48-202ENST00000409860 PODXLO00592 558 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 PHACTR2O75167 634 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 GALTP07902 379 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 CDK11BP21127 795 aaKnown RBP22.27■■□□□ 1.16
C4orf48-202ENST00000409860 GCLMP48507 274 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 TCP11X2Q5H9J9 407 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 PPP2R2DQ66LE6 453 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 KCNT2Q6UVM3 1135 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 TRAPPC11Q7Z392 1133 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 C1orf127Q8N9H9 656 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 ZNF516Q92618 1163 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 TIFAQ96CG3 184 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 SAMD11Q96NU1 681 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 COLEC11Q9BWP8 271 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 TMEM8AQ9HCN3 771 aa22.27■■□□□ 1.16
C4orf48-202ENST00000409860 NRP1O14786 923 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 N4BP1O75113 896 aaKnown RBP22.26■■□□□ 1.15
C4orf48-202ENST00000409860 ITGB3P05106 788 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 TPM2P07951 284 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 KRT19P08727 400 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 ZNF18P17022 549 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 CTNNB1P35222 781 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 PPM1AP35813 382 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 MXI1P50539 228 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 CLCNKBP51801 687 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 RBP5P82980 135 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 PPP3CAQ08209 521 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 MAN2A1Q16706 1144 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 UPP1Q16831 310 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 C9orf57Q5W0N0 161 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 KRT39Q6A163 491 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 SV2AQ7L0J3 742 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 TGS1Q96RS0 853 aaKnown RBP22.26■■□□□ 1.15
C4orf48-202ENST00000409860 SLC28A3Q9HAS3 691 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 CACNG4Q9UBN1 327 aa22.26■■□□□ 1.15
C4orf48-202ENST00000409860 ARHGEF15O94989 841 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 AFPP02771 609 aaKnown RBP22.25■■□□□ 1.15
C4orf48-202ENST00000409860 C4BPAP04003 597 aaKnown RBP22.25■■□□□ 1.15
C4orf48-202ENST00000409860 LINC00271P0C7V0 271 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 PRKCSHP14314 528 aaPredicted RBP22.25■■□□□ 1.15
C4orf48-202ENST00000409860 POLR2BP30876 1174 aaKnown RBP22.25■■□□□ 1.15
C4orf48-202ENST00000409860 BMPR1AP36894 532 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 PBX3P40426 434 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 TAP1Q03518 808 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 TRPC3Q13507 836 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 ZACNQ401N2 412 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 TDRD10Q5VZ19 366 aaKnown RBP22.25■■□□□ 1.15
C4orf48-202ENST00000409860 DCLRE1AQ6PJP8 1040 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 ZNF560Q96MR9 790 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 PAAF1Q9BRP4 392 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 TUBGCP2Q9BSJ2 902 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 PLVAPQ9BX97 442 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 HSD3B7Q9H2F3 369 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 AGAP1Q9UPQ3 857 aa22.25■■□□□ 1.15
C4orf48-202ENST00000409860 ANO9A1A5B4 782 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 TMEM189-UBE2V1I3L0A0 370 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 B3GAT3O94766 335 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 PNPLA4P41247 253 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 KCNH2Q12809 1159 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 C15orf39Q6ZRI6 1047 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 SLC39A11Q8N1S5 342 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 TMEM130Q8N3G9 435 aa22.24■■□□□ 1.15
C4orf48-202ENST00000409860 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms