RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 VAMP7P51809 220 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TIMM10P62072 90 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RBBP4Q09028 425 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CDC16Q13042 620 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PNMA1Q8ND90 353 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 KLHDC4Q8TBB5 520 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L12C9JPN9 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP17L21D6R901 530 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CYP17A1P05093 508 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 KLRC2P26717 231 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CCT5P48643 541 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 CNGA2Q16280 664 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 DIS3L2Q8IYB7 885 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 SRBD1Q8N5C6 995 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 MCPH1Q8NEM0 835 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 USP7Q93009 1102 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 OMDQ99983 421 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 METTL22Q9BUU2 404 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 BRINP2Q9C0B6 783 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 NCOA5Q9HCD5 579 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 SOHLH2Q9NX45 425 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 TAB2Q9NYJ8 693 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HCN3Q9P1Z3 774 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HERC5Q9UII4 1024 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 MAGEC1O60732 1142 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 RASGRP1O95267 797 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 S100A5P33763 92 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 PPIL2Q13356 520 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 ME3Q16798 604 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 HEATR6Q6AI08 1181 aaKnown RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 C12orf50Q8NA57 414 aaPredicted RBP3.56□□□□□ -1.84
NEB-204ENST00000409198 PNKPQ96T60 521 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 EMILIN1Q9Y6C2 1016 aa3.56□□□□□ -1.84
NEB-204ENST00000409198 C3orf70A6NLC5 250 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 ERVV-2B6SEH9 535 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 DFFAO00273 331 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 CTDSPL2Q05D32 466 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 PYROXD1Q8WU10 500 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 KIF12Q96FN5 646 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 APOBEC2Q9Y235 224 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 KHDRBS3O75525 346 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 HMBSP08397 361 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MBL2P11226 248 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 AP3M2P53677 418 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 NME3Q13232 169 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 TEAD4Q15561 434 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 RPTNQ6XPR3 784 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 CYP4Z2PQ8N1L4 340 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 IP6K1Q92551 441 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 FBXO2Q9UK22 296 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 ANKRD65E5RJM6 399 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 hCG_1984214I3L0E3 225 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 GPR182O15218 404 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MEFVO15553 781 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 ALPPL2P10696 532 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 TPI1P60174 286 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 RAB2AP61019 212 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 CACNB1Q02641 598 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 ZNF284Q2VY69 593 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 FAM26FQ5R3K3 315 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 TYW1BQ6NUM6 668 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 CENPUQ71F23 418 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 ANKRD44Q8N8A2 993 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MYCBPAPQ8TBZ2 947 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MYO5BQ9ULV0 1848 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 PIK3R2O00459 728 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 GPAA1O43292 621 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 HNRNPCP07910 306 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-204ENST00000409198 ESRRAP11474 423 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 CXCR2P25025 360 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MAPKAPK2P49137 400 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 SLC11A2P49281 568 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 HUNKP57058 714 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 AP1S1P61966 158 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 RPL19P84098 196 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.55□□□□□ -1.84
NEB-204ENST00000409198 ZSCAN26Q16670 478 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 GRAMD4Q6IC98 578 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 HIBCHQ6NVY1 386 aaPredicted RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 NEK10Q6ZWH5 1172 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 JADE3Q92613 823 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 OSBP2Q969R2 916 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 SPATA9Q9BWV2 254 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 OSGEPL1Q9H4B0 414 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 MRPS17Q9Y2R5 130 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 VIRMAQ69YN4 1812 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 UBE4BO95155 1302 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 A8MXQ7 604 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 ASS1P00966 412 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 THOP1P52888 689 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 ZNF699Q32M78 642 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 C10orf76Q5T2E6 689 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 SAMSN1Q9NSI8 373 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 UBN2Q6ZU65 1347 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 AFPP02771 609 aaKnown RBP3.55□□□□□ -1.84
NEB-204ENST00000409198 CYP2C19P33261 490 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 PRIM2P49643 509 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 GYS2P54840 703 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 LAYNQ6UX15 382 aa3.55□□□□□ -1.84
NEB-204ENST00000409198 LRRC74BQ6ZQY2 392 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms