RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CLUL1Q15846 466 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 UPP1Q16831 310 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 KNOP1Q1ED39 458 aaKnown RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 RTP2Q5QGT7 225 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 FAM171A1Q5VUB5 890 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 PRSS55Q6UWB4 352 aaPredicted RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 CEP57Q86XR8 500 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 RNF168Q8IYW5 571 aaPredicted RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 VN1R2Q8NFZ6 395 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 TIGD1Q96MW7 591 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 GBP4Q96PP9 640 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 UBE2ZQ9H832 354 aaPredicted RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 PLEKHA5Q9HAU0 1116 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 HOOK1Q9UJC3 728 aaKnown RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 BARX2Q9UMQ3 279 aaPredicted RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 UBQLN1Q9UMX0 589 aaKnown RBP11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 NUB1Q9Y5A7 615 aa11.16□□□□□ -0.62
TSPAN9-202ENST00000407263 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 H3BQ06 376 aaPredicted RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 XPOTO43592 962 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 IL18RAPO95256 599 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 SMC2O95347 1197 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 CXCL14O95715 111 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 GLP2RO95838 553 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 LDHAP00338 332 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 RPL17P18621 184 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 TKTP29401 623 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 KCNQ1P51787 676 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 TFAMQ00059 246 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 BMS1Q14692 1282 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 DUSP6Q16828 381 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 ISM2Q6H9L7 571 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 PDE12Q6L8Q7 609 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 KIAA1841Q6NSI8 718 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 CD300LGQ6UXG3 332 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 RDH13Q8NBN7 331 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 BEST2Q8NFU1 509 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 RIN2Q8WYP3 895 aaPredicted RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 HLA-CQ95604 372 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 KCTD10Q9H3F6 313 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 PDE11AQ9HCR9 933 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 MRPL17Q9NRX2 175 aaKnown RBP11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 RMND1Q9NWS8 449 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
TSPAN9-202ENST00000407263 PTPRDP23468 1912 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 TMEM189-UBE2V1I3L0A0 370 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 BIN1O00499 593 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 KIAA0391O15091 583 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 EXOC3O60645 756 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 EFEMP2O95967 443 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 NR3C1P04150 777 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 PSMD5Q16401 504 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 SNRNP35Q16560 246 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 CAMK4Q16566 473 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 USP41Q3LFD5 358 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 DCLRE1AQ6PJP8 1040 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 CD302Q8IX05 232 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 EFHBQ8N7U6 833 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 XXYLT1Q8NBI6 393 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 DDX27Q96GQ7 796 aaKnown RBP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 APOL5Q9BWW9 433 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 MTMR12Q9C0I1 747 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 ASB7Q9H672 318 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 BCCIPQ9P287 314 aaKnown RBP eCLIP11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 MAN1B1Q9UKM7 699 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 DOCK6Q96HP0 2047 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 MYH10P35580 1976 aa11.14□□□□□ -0.63
TSPAN9-202ENST00000407263 ZNF233A6NK53 670 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 SPDYE4A6NLX3 237 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 CLSTN1O94985 981 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 ITGB3P05106 788 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 CNPP09543 421 aaKnown RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 TMEM191BP0C7N4 346 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 DLATP10515 647 aaKnown RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 EPCAMP16422 314 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 LRPAP1P30533 357 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 RPL9P32969 192 aaKnown RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 DSG1Q02413 1049 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 CYP24A1Q07973 514 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 ELAVL2Q12926 359 aaKnown RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 ZBTB6Q15916 424 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 SPATA1Q5VX52 437 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 C12orf56Q8IXR9 622 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 CCDC127Q96BQ5 260 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 KLHL5Q96PQ7 755 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 GSDMAQ96QA5 445 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 TTPALQ9BTX7 342 aa11.13□□□□□ -0.63
TSPAN9-202ENST00000407263 EMILIN2Q9BXX0 1053 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms