RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ERAP1Q9NZ08 941 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 GCNT4Q9P109 453 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 MYH10P35580 1976 aa13.92□□□□□ -0.18
SMARCB1-203ENST00000407082 EMSYQ7Z589 1322 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 CLIC2O15247 247 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 TGFB1I1O43294 461 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 EXOC3O60645 756 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 NBNO60934 754 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 HIP1RO75146 1068 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 CLSTN1O94985 981 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 F2P00734 622 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 PLS3P13797 630 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 MARK3P27448 753 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 NMT1P30419 496 aaKnown RBP13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 FMO5P49326 533 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 PSEN2P49810 448 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 ZP2Q05996 745 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 ENPEPQ07075 957 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 MFSD10Q14728 455 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 GPNMBQ14956 572 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 TCEAL5Q5H9L2 206 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 BANK1Q8NDB2 785 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 BORCS6Q96GS4 357 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 PBKQ96KB5 322 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 CAPZA3Q96KX2 299 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 MED4Q9NPJ6 270 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 AGPAT3Q9NRZ7 376 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 CLDND1Q9NY35 253 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 MAFBQ9Y5Q3 323 aaPredicted RBP13.91□□□□□ -0.18
SMARCB1-203ENST00000407082 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 K7ENM7 598 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 HAS3O00219 553 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 PMM2O15305 246 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 SEC31AO94979 1220 aaKnown RBP13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 H2AFZP0C0S5 128 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 CKBP12277 381 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 SLC9A1P19634 815 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 IRS1P35568 1242 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 SLC26A2P50443 739 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 GPM6BQ13491 265 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 TERF2Q15554 542 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 H2AFVQ71UI9 128 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 IRF2BP2Q7Z5L9 587 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 FAM81BQ96LP2 452 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 STRA6Q9BX79 667 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 UBXN6Q9BZV1 441 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 ABCB6Q9NP58 842 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 HDAC6Q9UBN7 1215 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 MUTYHQ9UIF7 546 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 PCDHGC5Q9Y5F6 944 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 DUSP10Q9Y6W6 482 aa13.9□□□□□ -0.18
SMARCB1-203ENST00000407082 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 SFI1A8K8P3 1242 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 EFCAB14O75071 495 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PPP1R37O75864 691 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PARNO95453 639 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 AMHP03971 560 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ATP4AP20648 1035 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 SOX5P35711 763 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 RARRES1P49788 294 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 JAM2P57087 298 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 VSNL1P62760 191 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 MYL7Q01449 175 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 BFSP1Q12934 665 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 UGCGQ16739 394 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 TIGD5Q53EQ6 642 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ALKBH5Q6P6C2 394 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF771Q7L3S4 317 aaPredicted RBP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 CREG2Q8IUH2 290 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ADHFE1Q8IWW8 467 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 DHX38Q92620 1227 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 KIFAP3Q92845 792 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PKNOX2Q96KN3 472 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PNKPQ96T60 521 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 EPC1Q9H2F5 836 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 PRKAG3Q9UGI9 489 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 CAPN6Q9Y6Q1 641 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 SCN10AQ9Y5Y9 1956 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 IGSF9BQ9UPX0 1349 aa13.89□□□□□ -0.19
SMARCB1-203ENST00000407082 ZMYM2Q9UBW7 1377 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 A0A087X0T9 212 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF862O60290 1169 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 UPP2O95045 317 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 CXCL10P02778 98 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 FAM228BP0C875 321 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 TNFRSF8P28908 595 aa13.88□□□□□ -0.19
SMARCB1-203ENST00000407082 YWHABP31946 246 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms