RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 FAM186BQ8IYM0 893 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 KRT78Q8N1N4 520 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CAMKK1Q8N5S9 505 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 ZNF480Q8WV37 535 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 RIN2Q8WYP3 895 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 FATE1Q969F0 183 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 ARL8AQ96BM9 186 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 CEP95Q96GE4 821 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 TNIP3Q96KP6 325 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 MNTQ99583 582 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 GPR87Q9BY21 358 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 B3GNT5Q9BYG0 378 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 SCAND2PQ9GZW5 306 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 RSAD1Q9HA92 442 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 PRDM16Q9HAZ2 1276 aa6.12□□□□□ -1.43
HMGB1P13-201ENST00000406019 GOLIM4O00461 696 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 AKAP8O43823 692 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 IPO13O94829 963 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 GASTP01350 101 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 MYL3P08590 195 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 ZFP36P26651 326 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 HTR1BP28222 390 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 IL12RB1P42701 662 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 MCAMP43121 646 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 CCT2P78371 535 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 LONRF1Q17RB8 773 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 KIAA0753Q2KHM9 967 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 C3orf36Q3SXR2 165 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 ANO6Q4KMQ2 910 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 MFSD14BQ5SR56 506 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 PRAMEF14Q5SWL7 426 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 ANKS6Q68DC2 871 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 DARS2Q6PI48 645 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 TRMT2AQ8IZ69 625 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 MB21D1Q8N884 522 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 GPR156Q8NFN8 814 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 OR5M3Q8NGP4 307 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 NRG4Q8WWG1 115 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 ATXN2LQ8WWM7 1075 aaKnown RBP6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 GREM2Q9H772 168 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 DMRT3Q9NQL9 472 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 FNIP2Q9P278 1114 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 DMTF1Q9Y222 760 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 POLHQ9Y253 713 aa6.11□□□□□ -1.43
HMGB1P13-201ENST00000406019 PQBP1O60828 265 aaKnown RBP6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SETSIPP0DME0 302 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 TRAPPC10P48553 1259 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 CACNB3P54284 484 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SWSAP1Q6NVH7 229 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SYT12Q8IV01 421 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SLC16A11Q8NCK7 471 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 PPM1EQ8WY54 764 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 PGBD4Q96DM1 585 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SGCZQ96LD1 299 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 CGRRF1Q99675 332 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 MAF1Q9H063 256 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 SIK3Q9Y2K2 1263 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 PCDHGB6Q9Y5F9 930 aa6.1□□□□□ -1.43
HMGB1P13-201ENST00000406019 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 MFAP3LO75121 409 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 PEX11BO96011 259 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 SLPIP03973 132 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 GNAT2P19087 354 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 NR4A1P22736 598 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 GUCY1A2P33402 732 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 SREBF1P36956 1147 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 SLC6A9P48067 706 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 DSC2Q02487 901 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 MGAT2Q10469 447 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 CRHR2Q13324 411 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 RAPGEF1Q13905 1077 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 SEPT2Q15019 361 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 MUM1L1Q5H9M0 696 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 RNF220Q5VTB9 566 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 RHOUQ7L0Q8 258 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 ZNF572Q7Z3I7 529 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 XYLT1Q86Y38 959 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 REPS2Q8NFH8 660 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 OR7D4Q8NG98 312 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 OR2I1PQ8NGU4 316 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 MDM1Q8TC05 714 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 BCO1Q9HAY6 547 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 GPRC5BQ9NZH0 403 aa6.09□□□□□ -1.43
HMGB1P13-201ENST00000406019 CAPN8A6NHC0 703 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 PHF2O75151 1096 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 ALOX15P16050 662 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 TYRP1P17643 537 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 HK1P19367 917 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 PEX2P28328 305 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 APBA1Q02410 837 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CHAF1AQ13111 956 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CNGB1Q14028 1251 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 CNN3Q15417 329 aaKnown RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 RABL3Q5HYI8 236 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 METRNLQ641Q3 311 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 DRICH1Q6PGQ1 229 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 C1orf228Q6PIY5 440 aa6.08□□□□□ -1.44
HMGB1P13-201ENST00000406019 Q6ZPA2 131 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms