RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 ZCWPW1Q9H0M4 648 aa16.52■□□□□ 0.23
ATG4B-205ENST00000404914 C12orf65Q9H3J6 166 aaKnown RBP16.52■□□□□ 0.23
ATG4B-205ENST00000404914 STARD13Q9Y3M8 1113 aa16.52■□□□□ 0.23
ATG4B-205ENST00000404914 NEU2Q9Y3R4 380 aa16.52■□□□□ 0.23
ATG4B-205ENST00000404914 USH1CQ9Y6N9 552 aa16.52■□□□□ 0.23
ATG4B-205ENST00000404914 MXRA7P84157 204 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 SETDB1Q15047 1291 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 TAF1BQ53T94 588 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-205ENST00000404914 TMEM154Q6P9G4 183 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 DSTYKQ6XUX3 929 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 TRABD2AQ86V40 505 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 FAM71AQ8IYT1 594 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
ATG4B-205ENST00000404914 SH2D3AQ9BRG2 576 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-205ENST00000404914 GOLGA8IPA6NC78 632 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 GOLGA8JA6NMD2 632 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 POC1B-GALNT4F8VUJ3 575 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 SMIM24O75264 130 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 SNUPNO95149 360 aaKnown RBP16.51■□□□□ 0.23
ATG4B-205ENST00000404914 BMP3P12645 472 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 VAMP7P51809 220 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 CACNB3P54284 484 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 RASA3Q14644 834 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 TEKT4Q8WW24 435 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 NRG4Q8WWG1 115 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 TSC22D3Q99576 134 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 METTL5Q9NRN9 209 aaKnown RBP16.51■□□□□ 0.23
ATG4B-205ENST00000404914 NMRK1Q9NWW6 199 aa16.51■□□□□ 0.23
ATG4B-205ENST00000404914 RBBP6Q7Z6E9 1792 aaKnown RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 A0A1W2PPM1 405 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 A0A1W2PRG0 241 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 CYP3A4P08684 503 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 SLC30A9Q6PML9 568 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.5■□□□□ 0.237e-6■■■□□ 16.3
ATG4B-205ENST00000404914 TEX9Q8N6V9 391 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 DNAJC9Q8WXX5 260 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 GRAMD1AQ96CP6 724 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 PRR11Q96HE9 360 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 TRAIPQ9BWF2 469 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 KIAA1586Q9HCI6 787 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 ANAPC7Q9UJX3 599 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 GTF3C4Q9UKN8 822 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 AHCYL1O43865 530 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 SORBS3O60504 671 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 EDF1O60869 148 aaKnown RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 BRD2P25440 801 aaKnown RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 CALRP27797 417 aaKnown RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 FOXB2Q5VYV0 432 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 IZUMO3Q5VZ72 239 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 INPP5DQ92835 1189 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 PAPOLBQ9NRJ5 636 aaKnown RBP16.5■□□□□ 0.23
ATG4B-205ENST00000404914 DLGAP2Q9P1A6 1054 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 KANSL3Q9P2N6 904 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 C2CD2Q9Y426 696 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 PCDHAC2Q9Y5I4 1007 aa16.5■□□□□ 0.23
ATG4B-205ENST00000404914 KLHL33A6NCF5 533 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 ANKRD33BA6NCL7 494 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 SIGLEC16A6NMB1 481 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 MAPK13O15264 365 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 GZMAP12544 262 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 CYP11B1P15538 503 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 PECAM1P16284 738 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-205ENST00000404914 CIITAP33076 1130 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 PAPOLAP51003 745 aaKnown RBP16.49■□□□□ 0.23
ATG4B-205ENST00000404914 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
ATG4B-205ENST00000404914 OTOAQ7RTW8 1153 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 APBB1IPQ7Z5R6 666 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-205ENST00000404914 FAM136AQ96C01 138 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 STRA6Q9BX79 667 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 MAGEB2O15479 319 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 GRIN3BO60391 1043 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 ADRB2P07550 413 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 RALAP11233 206 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 PPP1R15BQ5SWA1 713 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 AMNQ9BXJ7 453 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 USP20Q9Y2K6 914 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 ASB3Q9Y575 518 aa16.49■□□□□ 0.23
ATG4B-205ENST00000404914 COL11A2P13942 1736 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-205ENST00000404914 GSTTP1A0A1W2PQM5 241 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 K7ENM7 598 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 SMAPO00193 183 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 PSMD10O75832 226 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 MAGEA4P43358 317 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 OVGP1Q12889 678 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 MTDHQ86UE4 582 aaKnown RBP16.48■□□□□ 0.23
ATG4B-205ENST00000404914 FBXO11Q86XK2 927 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 MORC4Q8TE76 937 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 RBM15Q96T37 977 aaKnown RBP eCLIP16.48■□□□□ 0.231e-11■■□□□ 13.7
ATG4B-205ENST00000404914 TRABDQ9H4I3 376 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 NPHS2Q9NP85 383 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 GGA1Q9UJY5 639 aa16.48■□□□□ 0.23
ATG4B-205ENST00000404914 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms