RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KCNH2Q12809 1159 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 NRDE2Q9H7Z3 1164 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 DPP3Q9NY33 737 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 TNNC2P02585 160 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 TUSC3Q13454 348 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 MAN2A1Q16706 1144 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 ANKRD20A12PQ8NF67 263 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 DNAJB4Q9UDY4 337 aa35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 LIMA1Q9UHB6 759 aaKnown RBP35.98■■■■□ 3.35
CSNK1E-204ENST00000403904 LCHNA4D1U4 455 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 CASTOR2A6NHX0 329 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 C4BPAP04003 597 aaKnown RBP35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 DSC1Q08554 894 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 SCARA3Q6AZY7 606 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 SV2AQ7L0J3 742 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 TRAPPC11Q7Z392 1133 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 C1orf127Q8N9H9 656 aa35.97■■■■□ 3.35
CSNK1E-204ENST00000403904 STX10O60499 249 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 MYOGP15173 224 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 CYP3A5P20815 502 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 AP3M2P53677 418 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 CBWD6Q4V339 395 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 CBWD3Q5JTY5 395 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 CBWD5Q5RIA9 395 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 TDRD10Q5VZ19 366 aaKnown RBP35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 COLGALT2Q8IYK4 626 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 RABGGTAQ92696 567 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 PAAF1Q9BRP4 392 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 VPS16Q9H269 839 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 CWH43Q9H720 699 aa35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 MRPL42Q9Y6G3 142 aaKnown RBP35.96■■■■□ 3.35
CSNK1E-204ENST00000403904 ZC3H11AO75152 810 aaKnown RBP eCLIP35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 AFPP02771 609 aaKnown RBP35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 GTF2H1P32780 548 aa35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 BIRC3Q13489 604 aa35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 MIIPQ5JXC2 388 aa35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 TMEM8AQ9HCN3 771 aa35.95■■■■□ 3.35
CSNK1E-204ENST00000403904 HSFX4A0A1B0GTS1 333 aaPredicted RBP35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 HSFX3A0A1B0GWH4 333 aaPredicted RBP35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 FMO5P49326 533 aa35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 ZACNQ401N2 412 aa35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 VWA3BQ502W6 1294 aa35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 C15orf39Q6ZRI6 1047 aa35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 APTXQ7Z2E3 356 aaKnown RBP35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 FIBCD1Q8N539 461 aa35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 SP7Q8TDD2 431 aaPredicted RBP35.94■■■■□ 3.34
CSNK1E-204ENST00000403904 LRRC10BA6NIK2 292 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 PES1O00541 588 aaKnown RBP35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 ITGB3P05106 788 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 MXI1P50539 228 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 CLCNKBP51801 687 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 COPB1P53618 953 aaKnown RBP35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 SPOUT1Q5T280 376 aaKnown RBP35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 KRT39Q6A163 491 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 NDST4Q9H3R1 872 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 SIX4Q9UIU6 781 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 KRT19P08727 400 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 CXorf38Q8TB03 319 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 ITGA11Q9UKX5 1188 aa35.93■■■■□ 3.34
CSNK1E-204ENST00000403904 PHACTR2O75167 634 aa35.92■■■■□ 3.34
CSNK1E-204ENST00000403904 LRPAP1P30533 357 aa35.92■■■■□ 3.34
CSNK1E-204ENST00000403904 PBX2P40425 430 aa35.92■■■■□ 3.34
CSNK1E-204ENST00000403904 PBX3P40426 434 aa35.92■■■■□ 3.34
CSNK1E-204ENST00000403904 OR1G1P47890 313 aa35.92■■■■□ 3.34
CSNK1E-204ENST00000403904 PPEF2O14830 753 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 CST3P01034 146 aaPredicted RBP35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 POLR2BP30876 1174 aaKnown RBP35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 UPP1Q16831 310 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 C9orf57Q5W0N0 161 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 AGAP1Q9UPQ3 857 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 PCDHA11Q9Y5I1 949 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 GTF3C5Q9Y5Q8 519 aaPredicted RBP35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 KIAA1671Q9BY89 1806 aa35.91■■■■□ 3.34
CSNK1E-204ENST00000403904 VNN1O95497 513 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 TPM2P07951 284 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 BCAR1P56945 870 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 TAS1R2Q8TE23 839 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 UROC1Q96N76 676 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 PBX4Q9BYU1 374 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 COLQQ9Y215 455 aaPredicted RBP35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 SCN1AP35498 2009 aa35.9■■■■□ 3.34
CSNK1E-204ENST00000403904 ANO9A1A5B4 782 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 PODXLO00592 558 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 SERPINC1P01008 464 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 ALDH2P05091 517 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 GALTP07902 379 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 IGFBP6P24592 240 aaPredicted RBP35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 RPL9P32969 192 aaKnown RBP35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 SLC11A1P49279 550 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 FANCCQ00597 558 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 MYL7Q01449 175 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 TMEM175Q9BSA9 504 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 YBX2Q9Y2T7 364 aaKnown RBP35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 PRG3Q9Y2Y8 225 aaPredicted RBP35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 PIRO00625 290 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 NRP1O14786 923 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 CA3P07451 260 aa35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 DDX27Q96GQ7 796 aaKnown RBP35.89■■■■□ 3.34
CSNK1E-204ENST00000403904 NT5C1B-RDH14C9J2C7 533 aa35.88■■■■□ 3.33
CSNK1E-204ENST00000403904 F8W810 466 aa35.88■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms