RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ARIH2O95376 493 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZKSCAN1P17029 563 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 CR2P20023 1033 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 HTR3AP46098 478 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 TM4SF4P48230 202 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 TRAPPC10P48553 1259 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PIK3CGP48736 1102 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 FMO1Q01740 532 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 DUSP8Q13202 625 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 IFIT5Q13325 482 aaKnown RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PKN1Q16512 942 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 GJC2Q5T442 439 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 ARHGEF18Q6ZSZ5 1173 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM124AQ86V42 546 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 TAX1BP1Q86VP1 789 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 TMEM151BQ8IW70 566 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 ELOA2Q8IYF1 753 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 KRT78Q8N1N4 520 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 POU5F2Q8N7G0 328 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PHKBQ93100 1093 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 KIAA1191Q96A73 305 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PHACTR3Q96KR7 559 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM167AQ96KS9 214 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 SGCZQ96LD1 299 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 OR14A2Q96R54 314 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 NDC1Q9BTX1 674 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 LSM14BQ9BX40 385 aaKnown RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 PCGF6Q9BYE7 350 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 LRRC27Q9C0I9 530 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 GOLGA2P5Q9HBQ8 144 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF287Q9HBT7 754 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 KIAA1586Q9HCI6 787 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 SACM1LQ9NTJ5 587 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 GJB4Q9NTQ9 266 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 MRPS18AQ9NVS2 196 aaKnown RBP4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 MOCS1Q9NZB8 636 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 CDC23Q9UJX2 597 aa4.81□□□□□ -1.64
HMGB1P17-201ENST00000403495 CDHR4A6H8M9 788 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 POM121BA6NF01 834 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 RASA4BC9J798 803 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 RASA4O43374 803 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PRSS23O95084 383 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 TNFSF4P23510 183 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 KCNJ5P48544 419 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 CASP5P51878 434 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF543Q08ER8 600 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 KIAA2012Q0VF49 1180 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 MORC3Q14149 939 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 CNGA2Q16280 664 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 BORAQ6PGQ7 559 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM111BQ6SJ93 734 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 TOGARAM2Q6ZUX3 1019 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 FRMD5Q7Z6J6 570 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 MB21D1Q8N884 522 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 MAML1Q92585 1016 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PGBD4Q96DM1 585 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF512Q96ME7 567 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PACSIN1Q9BY11 444 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 CPEB1Q9BZB8 566 aaKnown RBP4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 MEGF9Q9H1U4 602 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 ADAM7Q9H2U9 754 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 GSTO2Q9H4Y5 243 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PPCSQ9HAB8 311 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 SPON1Q9HCB6 807 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PLCB1Q9NQ66 1216 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 CNNM1Q9NRU3 951 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 USP40Q9NVE5 1235 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 PCDHGB2Q9Y5G2 931 aa4.8□□□□□ -1.64
HMGB1P17-201ENST00000403495 ZNF785A8K8V0 405 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 TMEM233B4DJY2 109 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 C8AP07357 584 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 GJB1P08034 283 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 HK1P19367 917 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 ABCB4P21439 1286 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CFPP27918 469 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CNR2P34972 360 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 STT3AP46977 705 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 PTTG1IPP53801 180 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 PPP2CBP62714 309 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 PPP2CAP67775 309 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 PTH1RQ03431 593 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CHAF1AQ13111 956 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 STK3Q13188 491 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CRB2Q5IJ48 1285 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 FAM209BQ5JX69 171 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 FKBP15Q5T1M5 1219 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 UTP14CQ5TAP6 766 aaKnown RBP4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 OTUD7BQ6GQQ9 843 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 SMC5Q8IY18 1101 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 LRRC56Q8IYG6 542 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CCDC33Q8N5R6 958 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 OR2C3Q8N628 320 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 POF1BQ8WVV4 589 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 CPPED1Q9BRF8 314 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 TRIM54Q9BYV2 358 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 GPRC5BQ9NZH0 403 aa4.79□□□□□ -1.64
HMGB1P17-201ENST00000403495 SRRDQ9UH36 339 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms