RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 VPS52Q8N1B4 723 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 C3orf58Q8NDZ4 430 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 BEST2Q8NFU1 509 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 MICAL1Q8TDZ2 1067 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 MRPL38Q96DV4 380 aaKnown RBP18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 GPR62Q9BZJ7 368 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 LMAN2LQ9H0V9 348 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 DPP3Q9NY33 737 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ADAM28Q9UKQ2 775 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FRMD4BQ9Y2L6 1034 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PCDHGC5Q9Y5F6 944 aa18.62■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PTPRJQ12913 1337 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 EFEMP2O95967 443 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 DLATP10515 647 aaKnown RBP18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 POU3F3P20264 500 aaPredicted RBP18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 LRPAP1P30533 357 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 NLRP12P59046 1061 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 LRRC63Q05C16 580 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 SURF1Q15526 300 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 SCARA3Q6AZY7 606 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 MLKLQ8NB16 471 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 OR5B17Q8NGF7 314 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PLEKHO2Q8TD55 490 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 DUSP9Q99956 384 aaKnown RBP18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 GZF1Q9H116 711 aaPredicted RBP18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TLR9Q9NR96 1032 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 LMCD1Q9NZU5 365 aa18.61■□□□□ 0.57
PTCHD3P3-201ENST00000403073 I3L4J1 428 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PPEF2O14830 753 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CETN3O15182 167 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 BRCC3P46736 316 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FKBP3Q00688 224 aaKnown RBP18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PAK1Q13153 545 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 DPCR1Q3MIW9 517 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TTI2Q6NXR4 508 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FUT10Q6P4F1 479 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 NT5DC4Q86YG4 428 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 MICALL1Q8N3F8 863 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CACTINQ8WUQ7 758 aaKnown RBP18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 B3GALT6Q96L58 329 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FNBP1Q96RU3 617 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 INTS13Q9NVM9 706 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CHD7Q9P2D1 2997 aa18.6■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TMEM189-UBE2V1I3L0A0 370 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FSCN2O14926 492 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 TNNI1P19237 187 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PTMSP20962 102 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PSMC2P35998 433 aaKnown RBP18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 DLG4P78352 724 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 KLHL40Q2TBA0 621 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PLPP4Q5VZY2 271 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 C9orf57Q5W0N0 161 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 WDR49Q8IV35 697 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ZC3H3Q8IXZ2 948 aaKnown RBP18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 FAM186BQ8IYM0 893 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 RNF168Q8IYW5 571 aaPredicted RBP18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ZNF516Q92618 1163 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 CGRRF1Q99675 332 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 MTMR12Q9C0I1 747 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ZBP1Q9H171 429 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 SZT2Q5T011 3432 aa18.59■□□□□ 0.57
PTCHD3P3-201ENST00000403073 KIAA1671Q9BY89 1806 aa18.58■□□□□ 0.57
PTCHD3P3-201ENST00000403073 ANO9A1A5B4 782 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 BICDL2A1A5D9 508 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 LRRIQ3A6PVS8 624 aaPredicted RBP18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PIRO00625 290 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CXCL14O95715 111 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SOD2P04179 222 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TMEM191BP0C7N4 346 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 DUOXA2Q1HG44 320 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 FAM171A1Q5VUB5 890 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SASS6Q6UVJ0 657 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MED15Q96RN5 788 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 HERC2P3Q9BVR0 1158 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 NUB1Q9Y5A7 615 aa18.58■□□□□ 0.56
PTCHD3P3-201ENST00000403073 SF3B1O75533 1304 aaKnown RBP eCLIP18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 RALGAPA2Q2PPJ7 1873 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 HIDE1A8MVS5 230 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MAPK13O15264 365 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TNNC2P02585 160 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ITGB3P05106 788 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CTSAP10619 480 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CA8P35219 290 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 VAMP7P51809 220 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 TIGD5Q53EQ6 642 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 C1orf220Q5T0J3 134 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 ADGRD2Q7Z7M1 963 aa18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 MRPL43Q8N983 215 aaKnown RBP18.57■□□□□ 0.56
PTCHD3P3-201ENST00000403073 CXorf38Q8TB03 319 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms