RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ZNF558Q96NG5 402 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CGRRF1Q99675 332 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TMEM175Q9BSA9 504 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SIX4Q9UIU6 781 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 UBQLN1Q9UMX0 589 aaKnown RBP13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FRMD4BQ9Y2L6 1034 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PRG3Q9Y2Y8 225 aaPredicted RBP13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SCN1AP35498 2009 aa13.45□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ANO9A1A5B4 782 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 LETM1O95202 739 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TRIM49P0CI25 452 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TRIM49CP0CI26 452 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CYP3A5P20815 502 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PSMC2P35998 433 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 OR1G1P47890 313 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 BFSP1Q12934 665 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 NCAPHQ15003 741 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 UPP1Q16831 310 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ANO6Q4KMQ2 910 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SPOUT1Q5T280 376 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FILIP1Q7Z7B0 1213 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 WDR49Q8IV35 697 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RNF168Q8IYW5 571 aaPredicted RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TMC2Q8TDI7 906 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TSPAN18Q96SJ8 248 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SRRTQ9BXP5 876 aaKnown RBP13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 MTMR12Q9C0I1 747 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SLC38A7Q9NVC3 462 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DACH1Q9UI36 760 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SZT2Q5T011 3432 aa13.44□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CDH23Q9H251 3354 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 VWA8A3KMH1 1905 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RFXAPO00287 272 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PODXLO00592 558 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 LPXNO60711 386 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FGF18O76093 207 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DLATP10515 647 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DNAJB1P25685 340 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 VAMP7P51809 220 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 MARSP56192 900 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TFAMQ00059 246 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ENPEPQ07075 957 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PPP3CAQ08209 521 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CAMK1Q14012 370 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 HSP90AA2PQ14568 343 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SURF1Q15526 300 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 C15orf39Q6ZRI6 1047 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 NT5DC4Q86YG4 428 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ENOX1Q8TC92 643 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 HASPINQ8TF76 798 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GDPD5Q8WTR4 605 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SAMD11Q96NU1 681 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FAM193BQ96PV7 902 aaPredicted RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SAMSN1Q9NSI8 373 aaKnown RBP13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FAN1Q9Y2M0 1017 aa13.43□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TSC2P49815 1807 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 H3BNC9 293 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PIRO00625 290 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SPTLC1O15269 473 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GRM6O15303 877 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 C4BPAP04003 597 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RB1P06400 928 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GRIN2CQ14957 1233 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CDKAL1Q5VV42 579 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 Q7L0L9 218 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 TRIM59Q8IWR1 403 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 FBXO22Q8NEZ5 403 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SPPL3Q8TCT6 385 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SLC35C1Q96A29 364 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 UROC1Q96N76 676 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 GPR62Q9BZJ7 368 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ALG13Q9NP73 1137 aaKnown RBP13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 DPP3Q9NY33 737 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 SPG21Q9NZD8 308 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 RWDD3Q9Y3V2 267 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 NFE2L3Q9Y4A8 694 aa13.42□□□□□ -0.26
HLA-DQB1-203ENST00000399082 XPOTO43592 962 aaKnown RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 VNN1O95497 513 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ALDH2P05091 517 aa13.41□□□□□ -0.26
HLA-DQB1-203ENST00000399082 ITGB3P05106 788 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms