RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 CAP2P40123 477 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 GPC3P51654 580 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 LIMK1P53667 647 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 CHMP4BP1P59074 171 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 TSPY1Q01534 308 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 SP3Q02447 781 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 ANKDD1AQ495B1 522 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 CCDC38Q502W7 563 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 CEP78Q5JTW2 689 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 MAPKAPK5Q8IW41 473 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.58
MSL3-207ENST00000398527 GMLQ99445 158 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 GBP3Q9H0R5 595 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 RIOX1Q9H6W3 641 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 STK17AQ9UEE5 414 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 AGO2Q9UKV8 859 aaKnown RBP11.46□□□□□ -0.58
MSL3-207ENST00000398527 PTCH2Q9Y6C5 1203 aa11.46□□□□□ -0.58
MSL3-207ENST00000398527 MAP2K7O14733 419 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 SUPT3HO75486 399 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 MUTP22033 750 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 S100A1P23297 94 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 KRT9P35527 623 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 ADCY8P40145 1251 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 BPIFB4P59827 614 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 CRHR2Q13324 411 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 KARSQ15046 597 aaKnown RBP11.45□□□□□ -0.58
MSL3-207ENST00000398527 MTERF2Q49AM1 385 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 CEP85LQ5SZL2 805 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 ZNF598Q86UK7 904 aaKnown RBP11.45□□□□□ -0.58
MSL3-207ENST00000398527 ARHGAP18Q8N392 663 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 BBOF1Q8ND07 529 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 NXPE3Q969Y0 559 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 CNDP1Q96KN2 507 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 SAMD11Q96NU1 681 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 TTYH3Q9C0H2 523 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 TMEM60Q9H2L4 133 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 INIPQ9NRY2 104 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 ZNF148Q9UQR1 794 aa11.45□□□□□ -0.58
MSL3-207ENST00000398527 MRPL11Q9Y3B7 192 aaKnown RBP11.45□□□□□ -0.58
MSL3-207ENST00000398527 PVALEFA0A1B0GWK0 134 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 CD86P42081 329 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 CDK8P49336 464 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 KPNA1P52294 538 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 BLVRAP53004 296 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 AMPD2Q01433 879 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 RUNX1T1Q06455 604 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 NEK8Q86SG6 692 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 TOR1AIP2Q8NFQ8 470 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 FATE1Q969F0 183 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 OPTNQ96CV9 577 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 RRP36Q96EU6 259 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 ERGIC2Q96RQ1 377 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 NUP88Q99567 741 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 MXD3Q9BW11 206 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 ACBD3Q9H3P7 528 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 TAB2Q9NYJ8 693 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 SAP30BPQ9UHR5 308 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 BAZ2BQ9UIF8 2168 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 ZNF536O15090 1300 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 KLRF2D3W0D1 207 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 HDAC3O15379 428 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 RASGRP1O95267 797 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 NDUFA10O95299 355 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 ZBTB48P10074 688 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 HNRNPH3P31942 346 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 PPM1FP49593 454 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
MSL3-207ENST00000398527 C21orf58P58505 322 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 UBXN1Q04323 297 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 PTPN21Q16825 1174 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 TATDN1Q6P1N9 297 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 DBX2Q6ZNG2 339 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 PPP1R14CQ8TAE6 165 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
MSL3-207ENST00000398527 P2RX5Q93086 422 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 PRPF18Q99633 342 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 TRIM9Q9C026 710 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 ZCCHC17Q9NP64 241 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 DDX18Q9NVP1 670 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 SUCLA2Q9P2R7 463 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 MTRF1LQ9UGC7 380 aaKnown RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 CIDEBQ9UHD4 219 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 CFL2Q9Y281 166 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 GDAQ9Y2T3 454 aa11.44□□□□□ -0.58
MSL3-207ENST00000398527 GREB1LQ9C091 1923 aaPredicted RBP11.44□□□□□ -0.58
MSL3-207ENST00000398527 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 HAT1O14929 419 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 ADAMTS3O15072 1205 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 STRNO43815 780 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 GLI1P08151 1106 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 ALAS2P22557 587 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 GRK2P25098 689 aa11.43□□□□□ -0.58
MSL3-207ENST00000398527 SMAD4Q13485 552 aaKnown RBP11.43□□□□□ -0.58
MSL3-207ENST00000398527 PSMD6Q15008 389 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms