RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 HPS3Q969F9 1004 aa20.43■□□□□ 0.86
COLCA2-201ENST00000398035 C18orf25Q96B23 403 aaPredicted RBP20.43■□□□□ 0.86
COLCA2-201ENST00000398035 FGFBP2Q9BYJ0 223 aa20.43■□□□□ 0.86
COLCA2-201ENST00000398035 GOLPH3LQ9H4A5 285 aa20.43■□□□□ 0.86
COLCA2-201ENST00000398035 GOLGA2P5Q9HBQ8 144 aa20.43■□□□□ 0.86
COLCA2-201ENST00000398035 SLC39A2Q9NP94 309 aa20.43■□□□□ 0.86
COLCA2-201ENST00000398035 HOOK1Q9UJC3 728 aaKnown RBP20.43■□□□□ 0.86
COLCA2-201ENST00000398035 GLP2RO95838 553 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 ITIH3Q06033 890 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 BMT2Q1RMZ1 405 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 KMT5BQ4FZB7 885 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 ZBTB41Q5SVQ8 909 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 SPATA1Q5VX52 437 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 LLGL2Q6P1M3 1020 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 SMRP1Q8NCR6 262 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 ADAMTS19Q8TE59 1207 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 HASPINQ8TF76 798 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 HDAC7Q8WUI4 952 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 SCFD1Q8WVM8 642 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 FAM213AQ9BRX8 229 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 CACNG4Q9UBN1 327 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 PRKAG3Q9UGI9 489 aa20.42■□□□□ 0.86
COLCA2-201ENST00000398035 BARX2Q9UMQ3 279 aaPredicted RBP20.42■□□□□ 0.86
COLCA2-201ENST00000398035 SYN3O14994 580 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 TEX28O15482 410 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 KLRC4O43908 158 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 RPN1P04843 607 aaKnown RBP20.41■□□□□ 0.86
COLCA2-201ENST00000398035 FGFR3P22607 806 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 CLCN4P51793 760 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 FAM160A1Q05DH4 1040 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 TMEM132DQ14C87 1099 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 KNOP1Q1ED39 458 aaKnown RBP20.41■□□□□ 0.86
COLCA2-201ENST00000398035 CRELD2Q6UXH1 353 aaPredicted RBP20.41■□□□□ 0.86
COLCA2-201ENST00000398035 ANKS3Q6ZW76 656 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 GPD1LQ8N335 351 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 VN1R2Q8NFZ6 395 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 SLC22A17Q8WUG5 538 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
COLCA2-201ENST00000398035 TIGD1Q96MW7 591 aa20.41■□□□□ 0.86
COLCA2-201ENST00000398035 ZNF233A6NK53 670 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 MBTPS2O43462 519 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 SPAG1Q07617 926 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 DPYDQ12882 1025 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 SURF1Q15526 300 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 SMAD2Q15796 467 aaKnown RBP20.4■□□□□ 0.86
COLCA2-201ENST00000398035 RTP2Q5QGT7 225 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 JADE1Q6IE81 842 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 CES5AQ6NT32 575 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 FMR1NBQ8N0W7 255 aaPredicted RBP20.4■□□□□ 0.86
COLCA2-201ENST00000398035 GLIS3Q8NEA6 775 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 LNX1Q8TBB1 728 aaPredicted RBP20.4■□□□□ 0.86
COLCA2-201ENST00000398035 UHRF1Q96T88 793 aaPredicted RBP20.4■□□□□ 0.86
COLCA2-201ENST00000398035 CBWD1Q9BRT8 395 aa20.4■□□□□ 0.86
COLCA2-201ENST00000398035 DLL1O00548 723 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 RHOBTB3O94955 611 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 HOXD13P35453 343 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 STK4Q13043 487 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 KCNB1Q14721 858 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 CD300LGQ6UXG3 332 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 BRSK2Q8IWQ3 736 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 ELOA2Q8IYF1 753 aaPredicted RBP20.39■□□□□ 0.85
COLCA2-201ENST00000398035 APPL2Q8NEU8 664 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 SUSD3Q96L08 255 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 COL25A1Q9BXS0 654 aaPredicted RBP20.39■□□□□ 0.85
COLCA2-201ENST00000398035 GTPBP4Q9BZE4 634 aaKnown RBP20.39■□□□□ 0.85
COLCA2-201ENST00000398035 S1PR5Q9H228 398 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 IKZF4Q9H2S9 585 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 PLEKHA4Q9H4M7 779 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 RBAKQ9NYW8 714 aaPredicted RBP20.39■□□□□ 0.85
COLCA2-201ENST00000398035 TUBGCP4Q9UGJ1 667 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 BACE2Q9Y5Z0 518 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 MYH15Q9Y2K3 1946 aa20.39■□□□□ 0.85
COLCA2-201ENST00000398035 ARHGEF37A1IGU5 675 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 H7C4K7 107 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 TGFB1I1O43294 461 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 GLUD1P00367 558 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 MCM4P33991 863 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 SNW1Q13573 536 aaKnown RBP20.38■□□□□ 0.85
COLCA2-201ENST00000398035 CLUL1Q15846 466 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 PSMD5Q16401 504 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 C3orf58Q8NDZ4 430 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 ENGASEQ8NFI3 743 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 TMEM174Q8WUU8 243 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 SAAL1Q96ER3 474 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 B3GALT6Q96L58 329 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 FBXL18Q96ME1 805 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 POP1Q99575 1024 aaKnown RBP20.38■□□□□ 0.85
COLCA2-201ENST00000398035 OXCT2Q9BYC2 517 aaPredicted RBP20.38■□□□□ 0.85
COLCA2-201ENST00000398035 ADAM7Q9H2U9 754 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 AGPAT3Q9NRZ7 376 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 HSPBP1Q9NZL4 362 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 MYO7AQ13402 2215 aa20.38■□□□□ 0.85
COLCA2-201ENST00000398035 SPDYE4A6NLX3 237 aa20.37■□□□□ 0.85
COLCA2-201ENST00000398035 BRCC3P46736 316 aa20.37■□□□□ 0.85
COLCA2-201ENST00000398035 RBM10P98175 930 aaKnown RBP20.37■□□□□ 0.85
COLCA2-201ENST00000398035 SYCE2Q6PIF2 218 aa20.37■□□□□ 0.85
COLCA2-201ENST00000398035 CYP26C1Q6V0L0 522 aa20.37■□□□□ 0.85
COLCA2-201ENST00000398035 NELFCDQ8IXH7 590 aa20.37■□□□□ 0.85
COLCA2-201ENST00000398035 C12orf56Q8IXR9 622 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms