RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SV2AQ7L0J3 742 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TRAPPC11Q7Z392 1133 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CMTR2Q8IYT2 770 aaKnown RBP21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 LRRC43Q8N309 656 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 C1orf127Q8N9H9 656 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 CXorf38Q8TB03 319 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 VPS16Q9H269 839 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 NDST4Q9H3R1 872 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 MMRN2Q9H8L6 949 aa21.04■□□□□ 0.96
MAP1LC3A-203ENST00000397709 B4GALT3O60512 393 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 N4BP1O75113 896 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TPM2P07951 284 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 LRPAP1P30533 357 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TUSC3Q13454 348 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 UVSSAQ2YD98 709 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PAN2Q504Q3 1202 aaKnown RBP21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 KRT39Q6A163 491 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 ZNF280BQ86YH2 543 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 TMEM130Q8N3G9 435 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 YME1L1Q96TA2 773 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 DPP3Q9NY33 737 aa21.03■□□□□ 0.96
MAP1LC3A-203ENST00000397709 A0A1B0GTH6 734 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 LGALS16A8MUM7 142 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 P4HA2O15460 535 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 DDHD2O94830 711 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 SERPINC1P01008 464 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 COLGALT2Q8IYK4 626 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 RAD9AQ99638 391 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 PRO3102Q9H379 93 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 NRDE2Q9H7Z3 1164 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 GOLGA2P5Q9HBQ8 144 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 SIX4Q9UIU6 781 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 ITGA11Q9UKX5 1188 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 INSL6Q9Y581 213 aa21.02■□□□□ 0.96
MAP1LC3A-203ENST00000397709 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 VNN1O95497 513 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 MYL7Q01449 175 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RNASELQ05823 741 aaKnown RBP21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 BIRC3Q13489 604 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SCARA3Q6AZY7 606 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SP7Q8TDD2 431 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 UROC1Q96N76 676 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 NAP1L5Q96NT1 182 aaPredicted RBP21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ZBED2Q9BTP6 218 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CWH43Q9H720 699 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RTN4Q9NQC3 1192 aaKnown RBP21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 HCSTQ9UBK5 93 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 COQ4Q9Y3A0 265 aa21.01■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ANO9A1A5B4 782 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GTPBP10A4D1E9 387 aaKnown RBP21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CASTOR2A6NHX0 329 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TLL1O43897 1013 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ITGB3P05106 788 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RPL9P32969 192 aaKnown RBP21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 EPC2Q52LR7 807 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 C9orf57Q5W0N0 161 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FAM109BQ6ICB4 259 aaPredicted RBP21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SARM1Q6SZW1 724 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TAS1R2Q8TE23 839 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FAM193BQ96PV7 902 aaPredicted RBP21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TMEM175Q9BSA9 504 aa21■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PES1O00541 588 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PODXLO00592 558 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PIRO00625 290 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PPEF2O14830 753 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 AP5Z1O43299 807 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 HLA-DRAP01903 254 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 POLR2BP30876 1174 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CLCNKBP51801 687 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RBP5P82980 135 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 NCOA4Q13772 614 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 UPP1Q16831 310 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FILIP1LQ4L180 1135 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TDHQ8IZJ6 230 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FBXL13Q8NEE6 735 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 DDX27Q96GQ7 796 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 IFNKQ9P0W0 207 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CACNG4Q9UBN1 327 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 DNAJB4Q9UDY4 337 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 MRPL42Q9Y6G3 142 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 KIAA1671Q9BY89 1806 aa20.99■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GBF1Q92538 1859 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GOLGA6L3A6NEY3 463 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GRXCR1A8MXD5 290 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PHACTR2O75167 634 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CST3P01034 146 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PIK3CAP42336 1068 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RABGGTBP53611 331 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 UBASH3AP57075 661 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CETN1Q12798 172 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TRPC3Q13507 836 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 NR1I3Q14994 352 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FKBP15Q5T1M5 1219 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CHRDL2Q6WN34 429 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SEMA4DQ92854 862 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PAAF1Q9BRP4 392 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 AGAP1Q9UPQ3 857 aa20.98■□□□□ 0.95
MAP1LC3A-203ENST00000397709 LCHNA4D1U4 455 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TEX33O43247 280 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms