RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 UBE2ZQ9H832 354 aaPredicted RBP27.53■■■□□ 2
TSPAN4-207ENST00000397411 TUBGCP4Q9UGJ1 667 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 DERAQ9Y315 318 aa27.53■■■□□ 2
TSPAN4-207ENST00000397411 NDUFV1P49821 464 aa27.52■■■□□ 2
TSPAN4-207ENST00000397411 EFHBQ8N7U6 833 aa27.52■■■□□ 2
TSPAN4-207ENST00000397411 ZSWIM2Q8NEG5 633 aa27.52■■■□□ 2
TSPAN4-207ENST00000397411 TMEM189-UBE2V1I3L0A0 370 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 SRGAP2BP0DMP2 458 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 KCNA5P22460 613 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 KLRC2P26717 231 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 ADAM15Q13444 863 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 PTPN14Q15678 1187 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 ZBTB6Q15916 424 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 BRSK2Q8IWQ3 736 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 RDH13Q8NBN7 331 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 RIN2Q8WYP3 895 aaPredicted RBP27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 GSDMAQ96QA5 445 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 MAPK8IP1Q9UQF2 711 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 IRAK3Q9Y616 596 aa27.51■■□□□ 1.99
TSPAN4-207ENST00000397411 LINC01565O15544 149 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 NFICP08651 508 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 MRPS5P82675 430 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 LLGL2Q6P1M3 1020 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 ELOA2Q8IYF1 753 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 XXYLT1Q8NBI6 393 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 CACTINQ8WUQ7 758 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 ATXN2LQ8WWM7 1075 aaKnown RBP27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 ERCC4Q92889 916 aaPredicted RBP27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 B3GALT6Q96L58 329 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 TTPALQ9BTX7 342 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 PCDHA5Q9Y5H7 936 aa27.5■■□□□ 1.99
TSPAN4-207ENST00000397411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 CALUO43852 315 aaPredicted RBP27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 CLASP2O75122 1294 aaKnown RBP27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 MCM4P33991 863 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 BRCC3P46736 316 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 GUCY2FP51841 1108 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 TFAMQ00059 246 aaKnown RBP27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 DSG1Q02413 1049 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 SURF1Q15526 300 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 KIAA0319Q5VV43 1072 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 SPATA1Q5VX52 437 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 KLHL5Q96PQ7 755 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 CHST7Q9NS84 486 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 C2CD2Q9Y426 696 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 ANK1P16157 1881 aa27.49■■□□□ 1.99
TSPAN4-207ENST00000397411 EXOC3O60645 756 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 LRPAP1P30533 357 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 TFF2Q03403 129 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 PPFIBP1Q86W92 1011 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 NT5DC4Q86YG4 428 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 RNF168Q8IYW5 571 aaPredicted RBP27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 GTPBP4Q9BZE4 634 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 DPP3Q9NY33 737 aa27.48■■□□□ 1.99
TSPAN4-207ENST00000397411 GOLGA6L22H0YM25 854 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 I3L4J1 428 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 PDXKO00764 312 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 EFEMP2O95967 443 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 CNPP09543 421 aaKnown RBP27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 CREMQ03060 361 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 CTC1Q2NKJ3 1217 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 PDXDC1Q6P996 788 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 CLEC17AQ6ZS10 378 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 CBWD2Q8IUF1 395 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 C3orf58Q8NDZ4 430 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 PDE11AQ9HCR9 933 aa27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 R3HCC1Q9Y3T6 440 aaKnown RBP27.47■■□□□ 1.99
TSPAN4-207ENST00000397411 H3BQ06 376 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 LILRB3O75022 631 aa27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 ADH1AP07327 375 aa27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 IGFBP6P24592 240 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 SNRNP35Q16560 246 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 ZNF658Q5TYW1 1059 aaPredicted RBP27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 C12orf56Q8IXR9 622 aa27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 GUF1Q8N442 669 aaKnown RBP27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 KCTD10Q9H3F6 313 aa27.46■■□□□ 1.99
TSPAN4-207ENST00000397411 SPDYE4A6NLX3 237 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 CLUL1Q15846 466 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 ISM2Q6H9L7 571 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 PRSS55Q6UWB4 352 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 CD300LGQ6UXG3 332 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 DSTYKQ6XUX3 929 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 GPR65Q8IYL9 337 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 SMYD4Q8IYR2 804 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 TMEM130Q8N3G9 435 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 CASP10Q92851 521 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 FNBP1Q96RU3 617 aa27.45■■□□□ 1.98
TSPAN4-207ENST00000397411 NR3C1P04150 777 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 TMEM191BP0C7N4 346 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 FGFR3P22607 806 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 COL19A1Q14993 1142 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 PSMD5Q16401 504 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 RTP2Q5QGT7 225 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 C9orf57Q5W0N0 161 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 GLYCTKQ8IVS8 523 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 EFCAB13Q8IY85 973 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 ANKRD36BP1Q96IX9 119 aa27.44■■□□□ 1.98
TSPAN4-207ENST00000397411 FBXL18Q96ME1 805 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms