RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 BEST2Q8NFU1 509 aa22.69■■□□□ 1.22
SEC13-207ENST00000397105 SPATA20Q8TB22 786 aa22.69■■□□□ 1.22
SEC13-207ENST00000397105 AUTS2Q8WXX7 1259 aa22.69■■□□□ 1.22
SEC13-207ENST00000397105 PABPC5Q96DU9 382 aaKnown RBP22.69■■□□□ 1.22
SEC13-207ENST00000397105 CHST7Q9NS84 486 aa22.69■■□□□ 1.22
SEC13-207ENST00000397105 PDXKO00764 312 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 NFICP08651 508 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 LRPAP1P30533 357 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 GTF2F1P35269 517 aaKnown RBP eCLIP22.68■■□□□ 1.22
SEC13-207ENST00000397105 CYP2J2P51589 502 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 DSG1Q02413 1049 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 PTPN14Q15678 1187 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 DUSP6Q16828 381 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 KIAA0319Q5VV43 1072 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 SPATA1Q5VX52 437 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 NT5DC4Q86YG4 428 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 GUF1Q8N442 669 aaKnown RBP22.68■■□□□ 1.22
SEC13-207ENST00000397105 EFHBQ8N7U6 833 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 FBXL18Q96ME1 805 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 EMILIN2Q9BXX0 1053 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 KCTD10Q9H3F6 313 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 PRDM6Q9NQX0 595 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 THEGQ9P2T0 379 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 MAPK8IP1Q9UQF2 711 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 TDRD15B5MCY1 1934 aaKnown RBP22.68■■□□□ 1.22
SEC13-207ENST00000397105 PLXNA4Q9HCM2 1894 aa22.68■■□□□ 1.22
SEC13-207ENST00000397105 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.67■■□□□ 1.22
SEC13-207ENST00000397105 C2CD2LO14523 706 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 CTC1Q2NKJ3 1217 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 ZNF658Q5TYW1 1059 aaPredicted RBP22.67■■□□□ 1.22
SEC13-207ENST00000397105 FAM171A1Q5VUB5 890 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 CD300LGQ6UXG3 332 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 EP400NLQ6ZTU2 488 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 CBWD2Q8IUF1 395 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 GPR65Q8IYL9 337 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 TMEM174Q8WUU8 243 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 ERCC4Q92889 916 aaPredicted RBP22.67■■□□□ 1.22
SEC13-207ENST00000397105 CLDND1Q9NY35 253 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 NUB1Q9Y5A7 615 aa22.67■■□□□ 1.22
SEC13-207ENST00000397105 CALUO43852 315 aaPredicted RBP22.66■■□□□ 1.22
SEC13-207ENST00000397105 EXOC3O60645 756 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 LILRB3O75022 631 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 IGFBP6P24592 240 aaPredicted RBP22.66■■□□□ 1.22
SEC13-207ENST00000397105 ADAM15Q13444 863 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 SURF1Q15526 300 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 SNRNP35Q16560 246 aaKnown RBP22.66■■□□□ 1.22
SEC13-207ENST00000397105 C3orf58Q8NDZ4 430 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 CACTINQ8WUQ7 758 aaKnown RBP22.66■■□□□ 1.22
SEC13-207ENST00000397105 B3GALT6Q96L58 329 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 TTPALQ9BTX7 342 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 UBE2ZQ9H832 354 aaPredicted RBP22.66■■□□□ 1.22
SEC13-207ENST00000397105 A0A0C4DFX4 3053 aa22.66■■□□□ 1.22
SEC13-207ENST00000397105 UNC80Q8N2C7 3258 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 GOLGA6L22H0YM25 854 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 CLASP2O75122 1294 aaKnown RBP22.65■■□□□ 1.22
SEC13-207ENST00000397105 CREMQ03060 361 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 MYBPC2Q14324 1141 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 AAK1Q2M2I8 961 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.65■■□□□ 1.22
SEC13-207ENST00000397105 CEP57Q86XR8 500 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 SLC9A9Q8IVB4 645 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.65■■□□□ 1.22
SEC13-207ENST00000397105 RDH13Q8NBN7 331 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 ATXN2LQ8WWM7 1075 aaKnown RBP22.65■■□□□ 1.22
SEC13-207ENST00000397105 RIN2Q8WYP3 895 aaPredicted RBP22.65■■□□□ 1.22
SEC13-207ENST00000397105 PDE11AQ9HCR9 933 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.65■■□□□ 1.22
SEC13-207ENST00000397105 DPP3Q9NY33 737 aa22.65■■□□□ 1.22
SEC13-207ENST00000397105 NR3C1P04150 777 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 CNPP09543 421 aaKnown RBP22.64■■□□□ 1.21
SEC13-207ENST00000397105 SRGAP2BP0DMP2 458 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 KCNA5P22460 613 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 GUCY2FP51841 1108 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 TFAMQ00059 246 aaKnown RBP22.64■■□□□ 1.21
SEC13-207ENST00000397105 RTP2Q5QGT7 225 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 PDXDC1Q6P996 788 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 PPFIBP1Q86W92 1011 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 KLHL5Q96PQ7 755 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 RXFP1Q9HBX9 757 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 DMAC2Q9NW81 257 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 TRAF3IP3Q9Y228 551 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 CITO14578 2027 aa22.64■■□□□ 1.21
SEC13-207ENST00000397105 SPTBN5Q9NRC6 3674 aaKnown RBP22.63■■□□□ 1.21
SEC13-207ENST00000397105 I3L4J1 428 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 LINC01565O15544 149 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 FGFR3P22607 806 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 PAX3P23760 479 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 KLRC2P26717 231 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 MCM4P33991 863 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 BRCC3P46736 316 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 NDUFV1P49821 464 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 WNT7BP56706 349 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 MRPS5P82675 430 aaKnown RBP22.63■■□□□ 1.21
SEC13-207ENST00000397105 COBLL1Q53SF7 1204 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 C9orf57Q5W0N0 161 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 EFCAB13Q8IY85 973 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 SMYD4Q8IYR2 804 aaPredicted RBP22.63■■□□□ 1.21
SEC13-207ENST00000397105 LMBRD1Q9NUN5 540 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 MAN1B1Q9UKM7 699 aa22.63■■□□□ 1.21
SEC13-207ENST00000397105 PIRO00625 290 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms