RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 CNTNAP2Q9UHC6 1331 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 CARSP49589 748 aaKnown RBP17.26■□□□□ 0.35
SNX6-202ENST00000396526 TFAMQ00059 246 aaKnown RBP17.26■□□□□ 0.35
SNX6-202ENST00000396526 DMTNQ08495 405 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 CFAP58Q5T655 872 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 TSHZ1Q6ZSZ6 1077 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.26■□□□□ 0.35
SNX6-202ENST00000396526 CEP83Q9Y592 693 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 LCTP09848 1927 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 IL18RAPO95256 599 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 INSRRP14616 1297 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 RWDD2BP57060 319 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 KYAT1Q16773 422 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 SEZ6Q53EL9 994 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 ZBTB41Q5SVQ8 909 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 RBBP8NLQ8NC74 664 aaPredicted RBP17.26■□□□□ 0.35
SNX6-202ENST00000396526 EXOC4Q96A65 974 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 VCPIP1Q96JH7 1222 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 RUNDC3BQ96NL0 473 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 FZD8Q9H461 694 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 FAM114A2Q9NRY5 505 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 MORF4L1Q9UBU8 362 aa17.26■□□□□ 0.35
SNX6-202ENST00000396526 H3BQF6 201 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 THAP12O43422 761 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 VNN1O95497 513 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 LGALS2P05162 132 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 SLC1A1P43005 524 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 CLCN3P51790 818 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 MKRN3Q13064 507 aaKnown RBP17.25■□□□□ 0.35
SNX6-202ENST00000396526 SPOPLQ6IQ16 392 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 OR5B17Q8NGF7 314 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 PPTC7Q8NI37 304 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 ANAPC7Q9UJX3 599 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 AKT3Q9Y243 479 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 ZEB2O60315 1214 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 ARHGAP1Q07960 439 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
SNX6-202ENST00000396526 NAA35Q5VZE5 725 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 MCOLN2Q8IZK6 566 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 TRAPPC12Q8WVT3 735 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 MAIP1Q8WWC4 291 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 CETN2P41208 172 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 NFKBIZQ9BYH8 718 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 ADAM22Q9P0K1 906 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 CPSF3Q9UKF6 684 aaKnown RBP17.25■□□□□ 0.35
SNX6-202ENST00000396526 ADAM21Q9UKJ8 722 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 TNFSF13BQ9Y275 285 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 SCINQ9Y6U3 715 aa17.25■□□□□ 0.35
SNX6-202ENST00000396526 ESYT3A0FGR9 886 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 ATMINO43313 823 aaPredicted RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 ASS1P00966 412 aaKnown RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 NIF3L1Q9GZT8 377 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 AMACRQ9UHK6 382 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 COL1A2P08123 1366 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 FAM187AA6NFU0 413 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 ZBTB42B2RXF5 422 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 UNGP13051 313 aaPredicted RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 PPFIA1Q13136 1202 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 ZNF211Q13398 564 aaPredicted RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 DHX34Q14147 1143 aaKnown RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 APBB1IPQ7Z5R6 666 aaPredicted RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.24■□□□□ 0.35
SNX6-202ENST00000396526 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 ELMO3Q96BJ8 720 aa17.24■□□□□ 0.35
SNX6-202ENST00000396526 CASKIN2Q8WXE0 1202 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 MTMR12Q9C0I1 747 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 ABHD16BQ9H3Z7 469 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 RNPEPQ9H4A4 650 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 NUB1Q9Y5A7 615 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 RNF40O75150 1001 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 CHRNA3P32297 505 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 TNFSF9P41273 254 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 CENPCQ03188 943 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 ZNF699Q32M78 642 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 PLEKHH3Q7Z736 793 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 CPA5Q8WXQ8 436 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 MS4A4AQ96JQ5 239 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 APOBEC3GQ9HC16 384 aaKnown RBP17.23■□□□□ 0.35
SNX6-202ENST00000396526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.23■□□□□ 0.352e-7■■□□□ 12.7
SNX6-202ENST00000396526 PCDHA3Q9Y5H8 950 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 PTPRJQ12913 1337 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 GOLGA8KD6RF30 607 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 ZBTB48P10074 688 aaPredicted RBP17.23■□□□□ 0.35
SNX6-202ENST00000396526 CTNNA2P26232 953 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 GBP1P32455 592 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 GGCXP38435 758 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 DR1Q01658 176 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 TAPT1Q6NXT6 567 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 BRI3BPQ8WY22 251 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
SNX6-202ENST00000396526 FAM84AQ96KN4 292 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 ADPGKQ9BRR6 497 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 LCMT1Q9UIC8 334 aa17.23■□□□□ 0.35
SNX6-202ENST00000396526 PAPPA2Q9BXP8 1791 aa17.22■□□□□ 0.35
SNX6-202ENST00000396526 RBM47A0AV96 593 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms