RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 TMEM143Q96AN5 459 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 LRRC45Q96CN5 670 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 AP5M1Q9H0R1 490 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 EBF2Q9HAK2 575 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 F8VZ95 297 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 STAM2O75886 525 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 HMGCRP04035 888 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 RARBP10826 455 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 AKR1A1P14550 325 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 KLHL30Q0D2K2 578 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 PRPF4BQ13523 1007 aaKnown RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 FAM102BQ5T8I3 360 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 ARMC3Q5W041 872 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 TRIM68Q6AZZ1 485 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 NIPA1Q7RTP0 329 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 RAD54LQ92698 747 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 ZNF317Q96PQ6 595 aaPredicted RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 CCSER1Q9C0I3 900 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 ZCWPW1Q9H0M4 648 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 TMEM59LQ9UK28 342 aa11.01□□□□□ -0.65
TUBB-208ENST00000396389 DIS3Q9Y2L1 958 aaKnown RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 NOC2LQ9Y3T9 749 aaKnown RBP11.01□□□□□ -0.65
TUBB-208ENST00000396389 ARHGEF35A5YM69 484 aa11□□□□□ -0.65
TUBB-208ENST00000396389 LGALS2P05162 132 aa11□□□□□ -0.65
TUBB-208ENST00000396389 TGFB3P10600 412 aa11□□□□□ -0.65
TUBB-208ENST00000396389 ICAM3P32942 547 aa11□□□□□ -0.65
TUBB-208ENST00000396389 ATN1P54259 1190 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 PSMC5P62195 406 aa11□□□□□ -0.65
TUBB-208ENST00000396389 BIRC3Q13489 604 aa11□□□□□ -0.65
TUBB-208ENST00000396389 FSCN1Q16658 493 aaKnown RBP11□□□□□ -0.65
TUBB-208ENST00000396389 ZNF746Q6NUN9 644 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
TUBB-208ENST00000396389 SETD4Q9NVD3 440 aa11□□□□□ -0.65
TUBB-208ENST00000396389 MAP3K13O43283 966 aa11□□□□□ -0.65
TUBB-208ENST00000396389 MMP3P08254 477 aa11□□□□□ -0.65
TUBB-208ENST00000396389 KRT16P08779 473 aa11□□□□□ -0.65
TUBB-208ENST00000396389 XRCC5P13010 732 aaKnown RBP11□□□□□ -0.65
TUBB-208ENST00000396389 JAK3P52333 1124 aa11□□□□□ -0.65
TUBB-208ENST00000396389 IRX1P78414 480 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 RNASELQ05823 741 aaKnown RBP11□□□□□ -0.65
TUBB-208ENST00000396389 C11orf91Q3C1V1 193 aa11□□□□□ -0.65
TUBB-208ENST00000396389 B3GNT9Q6UX72 402 aa11□□□□□ -0.65
TUBB-208ENST00000396389 ZNF467Q7Z7K2 595 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 PIAS4Q8N2W9 510 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 MAB21L3Q8N8X9 362 aa11□□□□□ -0.65
TUBB-208ENST00000396389 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
TUBB-208ENST00000396389 ADAM7Q9H2U9 754 aa11□□□□□ -0.65
TUBB-208ENST00000396389 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
TUBB-208ENST00000396389 RNF14Q9UBS8 474 aa11□□□□□ -0.65
TUBB-208ENST00000396389 DBR1Q9UK59 544 aaKnown RBP11□□□□□ -0.65
TUBB-208ENST00000396389 PCDHGC5Q9Y5F6 944 aa11□□□□□ -0.65
TUBB-208ENST00000396389 KIAA1217Q5T5P2 1943 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 H3BRB1 525 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 ABL2P42684 1182 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 ORC2Q13416 577 aaPredicted RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 LAMC2Q13753 1193 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 ARSHQ5FYA8 562 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 TRPM8Q7Z2W7 1104 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 DAAM2Q86T65 1068 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 TAX1BP1Q86VP1 789 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 C1orf131Q8NDD1 294 aaKnown RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 MORC4Q8TE76 937 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 CCDC47Q96A33 483 aaKnown RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 REEP2Q9BRK0 252 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 FAM129AQ9BZQ8 928 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 TUT1Q9H6E5 874 aaKnown RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 SLC12A4Q9UP95 1085 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 GNEQ9Y223 722 aaKnown RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 PTPN22Q9Y2R2 807 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 SERPING1P05155 500 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 SLC8A3P57103 927 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 PTK2Q05397 1052 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 SETDB1Q15047 1291 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 SLC18A3Q16572 532 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 CDCA2Q69YH5 1023 aaPredicted RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 IQSEC1Q6DN90 963 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 NME8Q8N427 588 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 SAAL1Q96ER3 474 aa10.99□□□□□ -0.65
TUBB-208ENST00000396389 CALR3Q96L12 384 aaKnown RBP10.99□□□□□ -0.65
TUBB-208ENST00000396389 SSU72P8A0A1W2PR75 194 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 SEPT4O43236 478 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 EVI5O60447 810 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 CREB1P16220 341 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 SFNP31947 248 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 RARRES1P49788 294 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 CLCN3P51790 818 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 PLTPP55058 493 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ADCY1Q08828 1119 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 LLGL1Q15334 1064 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 HERC4Q5GLZ8 1057 aaPredicted RBP10.98□□□□□ -0.65
TUBB-208ENST00000396389 AGBL2Q5U5Z8 902 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 AADACL2Q6P093 401 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 LRRC55Q6ZSA7 311 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 OTUD6AQ7L8S5 288 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ATP6V0A1Q93050 837 aa10.98□□□□□ -0.65
TUBB-208ENST00000396389 ITFG2Q969R8 447 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms