RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PLEKP08567 350 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 EEF1GP26641 437 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 KPNA1P52294 538 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 RAP1GDS1P52306 607 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TPD52P55327 224 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 OVGP1Q12889 678 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 BYSLQ13895 437 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 SLC29A2Q14542 456 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 SLC43A3Q8NBI5 491 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 OSCP1Q8WVF1 389 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 CITED4Q96RK1 184 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 SHCBP1LQ9BZQ2 653 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 NDST4Q9H3R1 872 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 GGA1Q9UJY5 639 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 CROTQ9UKG9 612 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 GDAQ9Y2T3 454 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 MAST2Q6P0Q8 1798 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 FAM205AQ6ZU69 1335 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 F8W031 263 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 FZD9O00144 591 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 KITP10721 976 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TKTP29401 623 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 CIITAP33076 1130 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 DNM2P50570 870 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ADAM17P78536 824 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ZNF844Q08AG5 666 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 PTGDRQ13258 359 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ITGADQ13349 1161 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 MAPK11Q15759 364 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 SH3D19Q5HYK7 790 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TRMT1LQ7Z2T5 733 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 SATL1Q86VE3 508 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TXNRD3Q86VQ6 643 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 SNX29Q8TEQ0 813 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TRIM56Q9BRZ2 755 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 KLHL4Q9C0H6 718 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 GPCPD1Q9NPB8 672 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 GGA3Q9NZ52 723 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 CTNNAL1Q9UBT7 734 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ADD3Q9UEY8 706 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 LIMA1Q9UHB6 759 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 ARHGAP26Q9UNA1 814 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 GPC6Q9Y625 555 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 MYH1P12882 1939 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 PGRMC1O00264 195 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 PEX1O43933 1283 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 OXCT1P55809 520 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 RPS8P62241 208 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 PDE4DQ08499 809 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ZNF211Q13398 564 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 ZC2HC1CQ53FD0 456 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 PERM1Q5SV97 790 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 B3GNT6Q6ZMB0 384 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 MMGT1Q8N4V1 131 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 RFWD2Q8NHY2 731 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 HPS1Q92902 700 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 CDHR1Q96JP9 859 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 ZNF184Q99676 751 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 CAAP1Q9H8G2 361 aa8.91□□□□□ -0.98
NDE1-202ENST00000396355 DCP1AQ9NPI6 582 aaPredicted RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
NDE1-202ENST00000396355 CFLARO15519 480 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ATP5HO75947 161 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ASMTLO95671 621 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 FGGP02679 453 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ENO1P06733 434 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 EIF3BP55884 814 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 ARHGAP4P98171 946 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ATP2C1P98194 919 aaPredicted RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 LRP8Q14114 963 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 LBRQ14739 615 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 CNGA3Q16281 694 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 PRAMEF18Q5VWM3 479 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 KAZNQ674X7 775 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ZNF444Q8N0Y2 327 aaPredicted RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 DEPTORQ8TB45 409 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 EPS8L3Q8TE67 593 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 PRPF18Q99633 342 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 SPATA16Q9BXB7 569 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 TBC1D10AQ9BXI6 508 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 GID8Q9NWU2 228 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 PHF24Q9UPV7 400 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 COL24A1Q17RW2 1714 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 OR6B1O95007 311 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 LYNP07948 512 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ENO2P09104 434 aaPredicted RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 KLK7P49862 253 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 STRN3Q13033 797 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 CUL1Q13616 776 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 KRT81Q14533 505 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 ITIH4Q14624 930 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 SLC35G1Q2M3R5 365 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 PDXDC2PQ6P474 469 aa8.9□□□□□ -0.98
NDE1-202ENST00000396355 PPWD1Q96BP3 646 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 WARS2Q9UGM6 360 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 HBS1LQ9Y450 684 aaKnown RBP8.9□□□□□ -0.98
NDE1-202ENST00000396355 MAD1L1Q9Y6D9 718 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms