RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 XKR9Q5GH70 373 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 NIM1KQ8IY84 436 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 RNF25Q96BH1 459 aaPredicted RBP16.58■□□□□ 0.24
PTBP1-204ENST00000394601 ECT2Q9H8V3 914 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 CTTNBP2NLQ9P2B4 639 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.24
PTBP1-204ENST00000394601 CALCAP01258 141 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 KRT76Q01546 638 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 AGBL2Q5U5Z8 902 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 KRT39Q6A163 491 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 CCT6BQ92526 530 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 TATDN2Q93075 761 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 ATG4CQ96DT6 458 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 STK32BQ9NY57 414 aa16.58■□□□□ 0.24
PTBP1-204ENST00000394601 SYNGAP1Q96PV0 1343 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 FAM187AA6NFU0 413 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 IFI35P80217 286 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 CDR2Q01850 454 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 CYP24A1Q07973 514 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 BIRC3Q13489 604 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 EAPPQ56P03 285 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 TMC2Q8TDI7 906 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 FMO2Q99518 471 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 PAEPP09466 180 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 NUDT17P0C025 328 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 RPL21P46778 160 aaKnown RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 BAATQ14032 418 aaPredicted RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 SV2AQ7L0J3 742 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 FBXO25Q8TCJ0 367 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 DDX23Q9BUQ8 820 aaKnown RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 ADAM33Q9BZ11 813 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 AZI2Q9H6S1 392 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.57■□□□□ 0.242e-7■■□□□ 13.9
PTBP1-204ENST00000394601 WDR90Q96KV7 1748 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 hCG_2014768A0A024R1R8 64 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 CETN1Q12798 172 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 GRIK3Q13003 919 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 TRMT1LQ7Z2T5 733 aaKnown RBP16.57■□□□□ 0.24
PTBP1-204ENST00000394601 PPM1KQ8N3J5 372 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 NUP85Q9BW27 656 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 HAPLN2Q9GZV7 340 aa16.57■□□□□ 0.24
PTBP1-204ENST00000394601 UNGP13051 313 aaPredicted RBP16.56■□□□□ 0.24
PTBP1-204ENST00000394601 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 PPP2R5EQ16537 467 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 RDM1Q8NG50 284 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 CCDC127Q96BQ5 260 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 NAP1L3Q99457 506 aaPredicted RBP16.56■□□□□ 0.24
PTBP1-204ENST00000394601 RAB17Q9H0T7 212 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 RAB20Q9NX57 234 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 GTF3C4Q9UKN8 822 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 ZNF214Q9UL59 606 aaPredicted RBP16.56■□□□□ 0.24
PTBP1-204ENST00000394601 PCDHA10Q9Y5I2 948 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 MGRN1O60291 552 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 RXRBP28702 533 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 MESDQ14696 234 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 C12orf50Q8NA57 414 aaPredicted RBP16.56■□□□□ 0.24
PTBP1-204ENST00000394601 WNT8AQ9H1J5 351 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 ADAM7Q9H2U9 754 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 GINM1Q9NU53 330 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 FGFR1OP2Q9NVK5 253 aa16.56■□□□□ 0.24
PTBP1-204ENST00000394601 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 KRT16P08779 473 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 GTF2H1P32780 548 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 SSR1P43307 286 aaKnown RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 MFAP3P55082 362 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ENPEPQ07075 957 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 XRCC4Q13426 336 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 NUGGCQ68CJ6 796 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 TRPM8Q7Z2W7 1104 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ZNF564Q8TBZ8 553 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 KCNN1Q92952 543 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 HERPUD2Q9BSE4 406 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ARHGAP28Q9P2N2 729 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ZNF112Q9UJU3 913 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 MYH9P35579 1960 aaKnown RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 KIF3CO14782 793 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 RARAP10276 462 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 CHRNA3P32297 505 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 DMP1Q13316 513 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 TNFAIP8L3Q5GJ75 292 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ANKRD20A2Q5SQ80 823 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ANKRD20A1Q5TYW2 823 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ANKRD20A3Q5VUR7 823 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 CIAPIN1Q6FI81 312 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 CCDC60Q8IWA6 550 aaPredicted RBP16.55■□□□□ 0.24
PTBP1-204ENST00000394601 FBXL13Q8NEE6 735 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
PTBP1-204ENST00000394601 MRRFQ96E11 262 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms