RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 SPATA1Q5VX52 437 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 EP400NLQ6ZTU2 488 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 NT5DC4Q86YG4 428 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 C12orf56Q8IXR9 622 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 XXYLT1Q8NBI6 393 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 SPATA20Q8TB22 786 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 AUTS2Q8WXX7 1259 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 PABPC5Q96DU9 382 aaKnown RBP20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 TUBGCP4Q9UGJ1 667 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 C2CD2Q9Y426 696 aa20.61■□□□□ 0.89
PDLIM7-204ENST00000393546 LRPAP1P30533 357 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 GTF2F1P35269 517 aaKnown RBP eCLIP20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 GLUD2P49448 558 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 SURF1Q15526 300 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 PTPN14Q15678 1187 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 DUSP6Q16828 381 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 FAM171A1Q5VUB5 890 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 GUF1Q8N442 669 aaKnown RBP20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 EFHBQ8N7U6 833 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 ERCC4Q92889 916 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 EMILIN2Q9BXX0 1053 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 KCTD10Q9H3F6 313 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 CHST7Q9NS84 486 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 CLDND1Q9NY35 253 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 NUB1Q9Y5A7 615 aa20.6■□□□□ 0.89
PDLIM7-204ENST00000393546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 C2CD2LO14523 706 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 CALUO43852 315 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 LILRB3O75022 631 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 NFICP08651 508 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 DSG1Q02413 1049 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 ADAM15Q13444 863 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 ZNF658Q5TYW1 1059 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 KIAA0319Q5VV43 1072 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 CD300LGQ6UXG3 332 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 CEP57Q86XR8 500 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 CBWD2Q8IUF1 395 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 GPR65Q8IYL9 337 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 RDH13Q8NBN7 331 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 CACTINQ8WUQ7 758 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 FBXL18Q96ME1 805 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 TTPALQ9BTX7 342 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 UBE2ZQ9H832 354 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 THEGQ9P2T0 379 aa20.59■□□□□ 0.89
PDLIM7-204ENST00000393546 GOLGA6L22H0YM25 854 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 EXOC3O60645 756 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 GUCY2FP51841 1108 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 COL19A1Q14993 1142 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 SNRNP35Q16560 246 aaKnown RBP20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 CTC1Q2NKJ3 1217 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 C3orf58Q8NDZ4 430 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 RIN2Q8WYP3 895 aaPredicted RBP20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 PDE11AQ9HCR9 933 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 LMBRD1Q9NUN5 540 aa20.58■□□□□ 0.89
PDLIM7-204ENST00000393546 ANK1P16157 1881 aa20.58■□□□□ 0.88
PDLIM7-204ENST00000393546 CLASP2O75122 1294 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 IGFBP6P24592 240 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 KLRC2P26717 231 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 BRCC3P46736 316 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 TFAMQ00059 246 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 MYBPC2Q14324 1141 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 AAK1Q2M2I8 961 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 PDXDC1Q6P996 788 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 SLC9A9Q8IVB4 645 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 EFCAB13Q8IY85 973 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 SMYD4Q8IYR2 804 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 TMEM174Q8WUU8 243 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 ATXN2LQ8WWM7 1075 aaKnown RBP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 B3GALT6Q96L58 329 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 KLHL5Q96PQ7 755 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 DMAC2Q9NW81 257 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 DPP3Q9NY33 737 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 TRAF3IP3Q9Y228 551 aa20.57■□□□□ 0.88
PDLIM7-204ENST00000393546 LINC01565O15544 149 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 NR3C1P04150 777 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 CNPP09543 421 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 SRGAP2BP0DMP2 458 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 PAX3P23760 479 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 MCM4P33991 863 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 NDUFV1P49821 464 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 CREMQ03060 361 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 C9orf57Q5W0N0 161 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 PPFIBP1Q86W92 1011 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 RXFP1Q9HBX9 757 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 MAN1B1Q9UKM7 699 aa20.56■□□□□ 0.88
PDLIM7-204ENST00000393546 I3L4J1 428 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 KCNA5P22460 613 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 FGFR3P22607 806 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 PRCPP42785 496 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 WNT7BP56706 349 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 MRPS5P82675 430 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 CAMK4Q16566 473 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 COBLL1Q53SF7 1204 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 RTP2Q5QGT7 225 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 ISM2Q6H9L7 571 aa20.55■□□□□ 0.88
PDLIM7-204ENST00000393546 LLGL2Q6P1M3 1020 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms